RNA id: TU206310



Basic Information


Item Value
RNA id TU206310
length 813
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G152270
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 5660086 ~ 5660898 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


acttACACACCTTTGTAACCCTTTAAGGTGTGTGTTATTGCCTTCCAATCTCTATTTGCCCCCTATATCCATCCAAAGCCCAGCCTAAGGCCTTCAAACAgggtccaacacacacacacacacacacacacacacacacacacatatgaacaCGTATTGCCCACTTCGCCTTCATTTTCATTTGGTGTCATATGTTTTGAGATCCTGACTTTGTATATGTTCTTTTTAcaacagtttatgttttactttggcttgtctttaaaatgtttgtttttgctgtgatttattttttcaactctattttttttttttttttttttgcatgtttccGTCACTTGTTTTCCTGTTGCTTCCCCTCTCTGAACAATCGTCCACGCCTCTCAAGCAATACTGCTGACAGGCACTGGGAGCTAGCTGctagaaagagagaagaatggGAGAGAGCGCAAAAGAGAGaatgggagagaaagagagagagagagagagagagaggtggactGGAGGCTGGTTCTTCGTCTGCTGTTCCTTCAGTATATTGTCGtcctgttaaagaaaaaaaagattattttgaaaataaatagaaaaataagttttgtaaaTGATCCTTCACTGTCGAGTGGAGAAAAAGCTATCAGAATATACTTTGTACACATGTCTAATCttgtaaaaatgcaaaaagaatacattttagAGATGAATCTGAAACCAGATATATTCTGCTAccctatactgtatgtgtaaggtttttttttctgttttttacagACAGCAACCACGTTTATCagtgtttcttttaaattgttttagtAACTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU206292 lncRNA downstream 53998 5601313 ~ 5606088 (-) True G152256
TU206284 lncRNA downstream 72351 5583379 ~ 5587735 (-) False G152249
TU206281 lncRNA downstream 72351 5585236 ~ 5587735 (-) False G152249
TU206282 lncRNA downstream 74917 5583379 ~ 5585169 (-) True G152249
TU206259 lncRNA downstream 150694 5508717 ~ 5509392 (-) True G152233
TU206322 lncRNA upstream 77033 5737931 ~ 5783361 (-) True G152280
TU206342 lncRNA upstream 131069 5791967 ~ 5792175 (-) True G152298
TU206347 lncRNA upstream 212879 5873777 ~ 5874308 (-) True G152302
TU206378 lncRNA upstream 287916 5948814 ~ 5949019 (-) True G152329
TU206379 lncRNA upstream 288379 5949277 ~ 5949495 (-) True G152330
XM_039824952.1 mRNA downstream 46364 5610590 ~ 5613722 (-) True atp5mf
XM_039824832.1 mRNA downstream 77222 5580263 ~ 5582864 (-) True bud31
XM_039825595.1 mRNA downstream 92547 5549291 ~ 5567539 (-) True top3a
XM_039825215.1 mRNA downstream 118885 5533856 ~ 5541201 (-) False cbx7a
XM_039824640.1 mRNA upstream 963 5661861 ~ 5717548 (-) False tnrc18
XM_039824636.1 mRNA upstream 963 5661861 ~ 5717548 (-) False tnrc18
XM_039824638.1 mRNA upstream 963 5661861 ~ 5717348 (-) False tnrc18
XM_039824637.1 mRNA upstream 963 5661861 ~ 5716883 (-) True tnrc18
XM_039824639.1 mRNA upstream 2552 5663450 ~ 5715557 (-) False tnrc18
TU206279 other downstream 46418 5574680 ~ 5613668 (-) False atp5mf
TU206278 other downstream 46418 5610556 ~ 5613668 (-) False atp5mf
TU206260 other downstream 77225 5580368 ~ 5582861 (-) False bud31
TU206270 other downstream 105836 5549318 ~ 5554250 (-) False top3a
TU206084 other downstream 195668 5461846 ~ 5464418 (-) True G152114
TU206522 other upstream 521510 6182408 ~ 6228114 (-) True G152441
TU206683 other upstream 1058886 6719784 ~ 6720643 (-) True G152567
XR_005641918.1 other upstream 2421240 8082138 ~ 8100398 (-) False LOC120574885
TU207167 other upstream 2780281 8441179 ~ 8444381 (-) True G152952
TU207482 other upstream 3070499 8731397 ~ 8733019 (-) True G153172

Expression Profile