RNA id: TU206554



Basic Information


Item Value
RNA id TU206554
length 520
lncRNA type inter_gene
GC content 0.52
exon number 2
gene id G152462
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 6312812 ~ 6313399 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GCGCTCTGTACTCACGGGGTCTAATGGTGGCACAGATACAAGGCACATGTTAAAAACATGTTACATGTGTATCTGAATTTGAAACGGAAATGAATATTGCATTCTTTTGCACTCTACGGAAATAAAGATGAAGCCAAGCGAAGCATTTGAAATCAGCGGATGTGTGCACTCACACAGCAGTACGGGAGGCTCCTCTGCAGTCTGATCCGCAGGGCGCAGGCGACTCTCGGCTGCCCAAAACCAGCGCAGATGGATTCTCCTCGACCGCTTCAGTTTTCACATGCATAGTCGCCACGTCGCTGCAGCCTCTTTGCAGATGCCCCTCCATGGCTGACACCAAAACGTGAGCCTAATAATGGAGGCGAGGGAGAGCCCGTTTCGTCTGCGCAGGCGTTCAACTGGCAGAAAGTTTGGAGCTCGCGGATGTCAAACGCACGGTGATGAGTTCAGCCTCGGTATGTGCCGCTAACGTCATGACTCCCGCGTGTCGGGTTTGATATGTGTGCGTGATGGACAAACG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU206520 lncRNA downstream 84698 6226638 ~ 6228114 (-) False G152441
TU206523 lncRNA downstream 103800 6182408 ~ 6209012 (-) False G152441
TU206490 lncRNA downstream 157712 6154874 ~ 6155100 (-) True G152422
TU206482 lncRNA downstream 164000 6146825 ~ 6148812 (-) True G152414
TU206473 lncRNA downstream 192145 6120448 ~ 6120667 (-) True G152406
TU206578 lncRNA upstream 25274 6338673 ~ 6339107 (-) True G152473
TU206601 lncRNA upstream 45670 6359069 ~ 6359288 (-) True G152492
TU206603 lncRNA upstream 64560 6377959 ~ 6378253 (-) True G152494
TU206604 lncRNA upstream 67476 6380875 ~ 6381191 (-) True G152495
TU206606 lncRNA upstream 73766 6387165 ~ 6391598 (-) True G152497
XM_039823846.1 mRNA downstream 68393 6229363 ~ 6244419 (-) True baiap2l2a
XM_039823671.1 mRNA downstream 143788 6155299 ~ 6169024 (-) True csf2rb
XM_039823670.1 mRNA downstream 143794 6155299 ~ 6169018 (-) False csf2rb
XM_039823673.1 mRNA downstream 143794 6155299 ~ 6169018 (-) False csf2rb
XM_039823669.1 mRNA downstream 143794 6155299 ~ 6169018 (-) False csf2rb
XM_039824585.1 mRNA upstream 31921 6345320 ~ 6350264 (-) True ccdc97
XM_039825759.1 mRNA upstream 262745 6576144 ~ 6585025 (-) True desi1a
XM_039824026.1 mRNA upstream 293885 6607284 ~ 6649259 (-) True llgl1
XM_039824028.1 mRNA upstream 337430 6650829 ~ 6698387 (-) True myo15aa
XM_039825833.1 mRNA upstream 398225 6711624 ~ 6718897 (-) True drg2
TU206522 other downstream 84698 6182408 ~ 6228114 (-) True G152441
TU206279 other downstream 699144 5574680 ~ 5613668 (-) False atp5mf
TU206278 other downstream 699144 5610556 ~ 5613668 (-) False atp5mf
TU206260 other downstream 729951 5580368 ~ 5582861 (-) False bud31
TU206270 other downstream 758562 5549318 ~ 5554250 (-) False top3a
TU206683 other upstream 406385 6719784 ~ 6720643 (-) True G152567
XR_005641918.1 other upstream 1768739 8082138 ~ 8100398 (-) False LOC120574885
TU207167 other upstream 2127780 8441179 ~ 8444381 (-) True G152952
TU207482 other upstream 2417998 8731397 ~ 8733019 (-) True G153172
TU207525 other upstream 2498943 8812342 ~ 8816276 (-) False natd1

Expression Profile