RNA id: TU206694



Basic Information


Item Value
RNA id TU206694
length 295
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G152577
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 6756791 ~ 6757085 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


cattgtcactgttgttccccaacgttccctaaacgttctgtgttagtggggtagcagcaaactggactagtaggcctactagctgctgctgcggagctacaagaacaagtttgatagacgctggtttgcaggcacttctcctaactaactcagcttacccgtctcaacgtcttcatttggcgttttgctaaaaatagaaaaagttcatctggccgcgtcactttctagagctctcctttttttaaattgacgccttttcagtgccgttttgcgctttctactacccgtttaaaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005641813.1 lncRNA downstream 45592 6709402 ~ 6711199 (-) True LOC120574035
TU206674 lncRNA downstream 157915 6597999 ~ 6598876 (-) True G152560
TU206672 lncRNA downstream 158948 6597354 ~ 6597843 (-) True G152559
TU206660 lncRNA downstream 328555 6427328 ~ 6428236 (-) True G152548
TU206606 lncRNA downstream 365193 6387165 ~ 6391598 (-) True G152497
TU206823 lncRNA upstream 15795 6772880 ~ 6773713 (-) False arhgdig
TU206870 lncRNA upstream 256162 7013247 ~ 7013685 (-) True G152720
TU206859 lncRNA upstream 264384 7021469 ~ 7038559 (-) True G152712
TU206881 lncRNA upstream 443602 7200687 ~ 7200912 (-) True G152730
TU206880 lncRNA upstream 447229 7204314 ~ 7206094 (-) True G152729
XM_039826238.1 mRNA downstream 511 6750266 ~ 6756280 (-) True slc25a17
XM_039825287.1 mRNA downstream 8382 6738111 ~ 6748409 (-) True znf598
XM_039825833.1 mRNA downstream 37894 6711624 ~ 6718897 (-) True drg2
XM_039825832.1 mRNA downstream 37898 6711624 ~ 6718893 (-) False drg2
XM_039824028.1 mRNA downstream 58404 6650829 ~ 6698387 (-) True myo15aa
XM_039825812.1 mRNA upstream 1175 6758260 ~ 6766315 (-) False rpusd1
XM_039825811.1 mRNA upstream 1175 6758260 ~ 6766306 (-) True rpusd1
XM_039823650.1 mRNA upstream 15795 6772880 ~ 6801536 (-) True arhgdig
XM_039825497.1 mRNA upstream 57591 6814676 ~ 6831673 (-) False clcn7
XM_039825496.1 mRNA upstream 57591 6814676 ~ 6831673 (-) True clcn7
TU206683 other downstream 36148 6719784 ~ 6720643 (-) True G152567
TU206522 other downstream 528677 6182408 ~ 6228114 (-) True G152441
TU206279 other downstream 1143123 5574680 ~ 5613668 (-) False atp5mf
TU206278 other downstream 1143123 5610556 ~ 5613668 (-) False atp5mf
TU206260 other downstream 1173930 5580368 ~ 5582861 (-) False bud31
XR_005641918.1 other upstream 1325053 8082138 ~ 8100398 (-) False LOC120574885
TU207167 other upstream 1684094 8441179 ~ 8444381 (-) True G152952
TU207482 other upstream 1974312 8731397 ~ 8733019 (-) True G153172
TU207525 other upstream 2055257 8812342 ~ 8816276 (-) False natd1
TU207545 other upstream 2096675 8853760 ~ 8856957 (-) True tufm

Expression Profile