RNA id: TU206859



Basic Information


Item Value
RNA id TU206859
length 854
lncRNA type sense_over
GC content 0.39
exon number 2
gene id G152712
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 7021469 ~ 7038559 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ctctctctctctgtctctttctctctctctctcttgctgtctTTCAGACGTATAAAAACATTGAACACAAAGTTGGTGCACTGTCTGACCCTCTGCATACTGTGTTAGCACCATTTTGTACTGAAGCCATGCCGTTATTAGATAAATAAGACAAAGATAGGAGGAAAGATGTTTTTGACTGGGATCTGATCACTTCCCAACATACTGGAACACTTGTTTCAGTAACCTAAGGTTAGCAGGCTTTGGTTTTGCTTTTGAAAATTGTGTTCTTTAAGTactataccatatatatatggTAAATAGTATTTGCACACAGTTAGTTCTCCACTAGATCTCCTAATAATTGGTGATCTGTCGCTACCTCTGTTCAATGTAAATGTTAGCAAAGAATTAGCAGGCTGTTGCAACACATACAAAGATCCCAAAATATATACTTTGCAACactttttttctcatgttttagTGTTTATAGTGTTGTCTGAGTTCACATTAAACCATTTATCACATCACTGGACAACACCTgatcactcactcacacacacacacacacacacacacacacacacacacacacacacacacagatacaaggGGAGGAGACAAAATAGCCATAATACAGAGAGAGTTCTGGAGGGAGAGCATGAGTAGCTAGTGTAAATGTTAACAGCTTTTTTTCTCAAACCTTTTCTGGGGCTGTGAGTAAAAAGTGAGTGTGAACtcaaagagagggaggaaatgcatttttgttttcttcgtTACCTCCCTAAGCCACCATTGCACTGTTTTGTATAAACTAACCATGAAACATCACCAAGCTGAAACCGTCACACCACTACTTTGAGAGATATTACCCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU206870 lncRNA downstream 7784 7013247 ~ 7013685 (-) True G152720
TU206823 lncRNA downstream 247756 6772880 ~ 6773713 (-) False arhgdig
TU206694 lncRNA downstream 264384 6756791 ~ 6757085 (-) True G152577
XR_005641813.1 lncRNA downstream 310270 6709402 ~ 6711199 (-) True LOC120574035
TU206674 lncRNA downstream 422593 6597999 ~ 6598876 (-) True G152560
TU206881 lncRNA upstream 162128 7200687 ~ 7200912 (-) True G152730
TU206880 lncRNA upstream 165755 7204314 ~ 7206094 (-) True G152729
TU206894 lncRNA upstream 292251 7330810 ~ 7356838 (-) True G152738
TU206905 lncRNA upstream 329235 7367794 ~ 7369853 (-) True G152748
TU206913 lncRNA upstream 439760 7478319 ~ 7478614 (-) True G152756
XM_039825197.1 mRNA downstream 15767 6980322 ~ 7005702 (-) False LOC120574761
XM_039825196.1 mRNA downstream 15767 6980323 ~ 7005702 (-) True LOC120574761
XM_039826090.1 mRNA downstream 63870 6921259 ~ 6957599 (-) False LOC120575358
XM_039826088.1 mRNA downstream 63870 6921259 ~ 6957599 (-) False LOC120575358
XM_039826086.1 mRNA downstream 65251 6919941 ~ 6956218 (-) True LOC120575358
XM_039824382.1 mRNA upstream 24297 7062856 ~ 7171440 (-) False LOC120574177
XM_039824381.1 mRNA upstream 37651 7076210 ~ 7171440 (-) True LOC120574177
XM_039824618.1 mRNA upstream 175789 7214348 ~ 7270791 (-) False clec16a
XM_039824615.1 mRNA upstream 175789 7214348 ~ 7270791 (-) True clec16a
XM_039824616.1 mRNA upstream 175789 7214348 ~ 7270791 (-) False clec16a
TU206683 other downstream 300826 6719784 ~ 6720643 (-) True G152567
TU206522 other downstream 793355 6182408 ~ 6228114 (-) True G152441
TU206279 other downstream 1407801 5574680 ~ 5613668 (-) False atp5mf
XR_005641918.1 other upstream 1043579 8082138 ~ 8100398 (-) False LOC120574885
TU207167 other upstream 1402620 8441179 ~ 8444381 (-) True G152952
TU207482 other upstream 1692838 8731397 ~ 8733019 (-) True G153172
TU207525 other upstream 1773783 8812342 ~ 8816276 (-) False natd1
TU207545 other upstream 1815201 8853760 ~ 8856957 (-) True tufm

Expression Profile