RNA id: TU206913



Basic Information


Item Value
RNA id TU206913
length 296
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G152756
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 7478319 ~ 7478614 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ttctcaataaatgcatgtataaaatgcaggggatatatttgtgtttcaatttacaatatgatcagctgttcactttgactttagcctataagttaggtttagaacatgatgttatctgttctgacatacagtgtgaaagcatttgtaaatttggcagtaaagatccattgttttggttttggtggagcttgtgtgtaaaagaagttcaagcattttaaatttgtgttaactgtatgcattttgtgtcaaagcaacaagaaatgtgttaattgtatagcctacacagacggatgttg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU206905 lncRNA downstream 108466 7367794 ~ 7369853 (-) True G152748
TU206894 lncRNA downstream 121481 7330810 ~ 7356838 (-) True G152738
TU206880 lncRNA downstream 272225 7204314 ~ 7206094 (-) True G152729
TU206881 lncRNA downstream 277407 7200687 ~ 7200912 (-) True G152730
TU206859 lncRNA downstream 439760 7021469 ~ 7038559 (-) True G152712
TU207003 lncRNA upstream 91104 7569718 ~ 7624994 (-) False grin2aa
TU207007 lncRNA upstream 92029 7570643 ~ 7625078 (-) False grin2aa
XR_005641917.1 lncRNA upstream 584387 8063001 ~ 8066280 (-) True LOC120574882
TU207058 lncRNA upstream 609312 8087926 ~ 8092269 (-) False G152863
TU207059 lncRNA upstream 609312 8087926 ~ 8092269 (-) False G152863
XM_039824628.1 mRNA downstream 156231 7305634 ~ 7322088 (-) False nubp1
XM_039824627.1 mRNA downstream 156234 7305634 ~ 7322085 (-) True nubp1
XM_039824625.1 mRNA downstream 175885 7277866 ~ 7302434 (-) True ciita
XM_039824626.1 mRNA downstream 180506 7277866 ~ 7297813 (-) False ciita
XM_039824617.1 mRNA downstream 207528 7214348 ~ 7270791 (-) False clec16a
XM_039824234.1 mRNA upstream 91212 7569826 ~ 7723914 (-) True grin2aa
XM_039824204.1 mRNA upstream 260965 7739579 ~ 7868877 (-) True LOC120574112
XM_039824205.1 mRNA upstream 260965 7739579 ~ 7868876 (-) False LOC120574112
XM_039824208.1 mRNA upstream 267137 7745751 ~ 7868881 (-) False LOC120574112
XM_039824206.1 mRNA upstream 267160 7745774 ~ 7868882 (-) False LOC120574112
TU206683 other downstream 757676 6719784 ~ 6720643 (-) True G152567
TU206522 other downstream 1250205 6182408 ~ 6228114 (-) True G152441
TU206279 other downstream 1864651 5574680 ~ 5613668 (-) False atp5mf
XR_005641918.1 other upstream 603524 8082138 ~ 8100398 (-) False LOC120574885
TU207167 other upstream 962565 8441179 ~ 8444381 (-) True G152952
TU207482 other upstream 1252783 8731397 ~ 8733019 (-) True G153172
TU207525 other upstream 1333728 8812342 ~ 8816276 (-) False natd1
TU207545 other upstream 1375146 8853760 ~ 8856957 (-) True tufm

Expression Profile