Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU209226 |
| length | 1226 |
| lncRNA type | sense_over |
| GC content | 0.45 |
| exon number | 2 |
| gene id | LOC120575506 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053126.1 |
| NCBI id | CM020923.1 |
| chromosome length | 38831509 |
| location | 12735444 ~ 12737483 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU209206 | lncRNA | downstream | 56393 | 12677493 ~ 12679110 (-) | True | LOC120574720 |
| XR_005641892.1 | lncRNA | downstream | 56413 | 12677555 ~ 12679090 (-) | False | LOC120574720 |
| XR_005641890.1 | lncRNA | downstream | 166807 | 12568219 ~ 12568696 (-) | True | LOC120574718 |
| XR_005641891.1 | lncRNA | downstream | 167693 | 12567178 ~ 12567810 (-) | True | LOC120574719 |
| TU209168 | lncRNA | downstream | 334028 | 12400252 ~ 12401475 (-) | True | G154368 |
| TU209256 | lncRNA | upstream | 29235 | 12766698 ~ 12768603 (-) | True | G154437 |
| TU209257 | lncRNA | upstream | 31946 | 12769409 ~ 12770122 (-) | True | G154438 |
| TU209269 | lncRNA | upstream | 41552 | 12779015 ~ 12781445 (-) | True | G154446 |
| TU209357 | lncRNA | upstream | 134095 | 12871558 ~ 12953388 (-) | False | G154515 |
| TU209363 | lncRNA | upstream | 136897 | 12874360 ~ 12931319 (-) | True | G154517 |
| XM_039825577.1 | mRNA | downstream | 8479 | 12694885 ~ 12727024 (-) | True | LOC120575015 |
| XM_039825576.1 | mRNA | downstream | 20805 | 12694885 ~ 12714698 (-) | False | LOC120575015 |
| XM_039825065.1 | mRNA | downstream | 170032 | 12437544 ~ 12565471 (-) | False | cep112 |
| XM_039825063.1 | mRNA | downstream | 170032 | 12437544 ~ 12565471 (-) | True | cep112 |
| XM_039825064.1 | mRNA | downstream | 170174 | 12437544 ~ 12565329 (-) | False | cep112 |
| XM_039823969.1 | mRNA | upstream | 9354 | 12746817 ~ 12749160 (-) | True | LOC120574004 |
| XM_039823970.1 | mRNA | upstream | 9354 | 12746817 ~ 12749150 (-) | False | LOC120574004 |
| XM_039823968.1 | mRNA | upstream | 16007 | 12753470 ~ 12760056 (-) | True | LOC120574003 |
| XM_039825827.1 | mRNA | upstream | 106933 | 12844396 ~ 12853731 (-) | True | cdr2a |
| XM_039825364.1 | mRNA | upstream | 123889 | 12861352 ~ 12863585 (-) | False | si:ch211-139g16.8 |
| XR_005641884.1 | other | downstream | 170032 | 12427504 ~ 12565471 (-) | False | cep112 |
| unassigned_transcript_847 | other | downstream | 1248578 | 11486854 ~ 11486925 (-) | True | trnaq-cug_14 |
| TU208722 | other | downstream | 1509957 | 11203450 ~ 11225546 (-) | True | G154033 |
| TU208632 | other | downstream | 1598021 | 11110968 ~ 11137482 (-) | False | tnrc6c1 |
| XR_005641866.1 | other | downstream | 1654897 | 11078676 ~ 11080606 (-) | False | LOC120574486 |
| unassigned_transcript_848 | other | upstream | 105430 | 12842893 ~ 12842974 (-) | True | trnal-uag_2 |
| XR_005641885.1 | other | upstream | 219059 | 12956522 ~ 12972810 (-) | False | iqck |
| TU209391 | other | upstream | 235869 | 12973332 ~ 12979685 (-) | False | sun1 |
| XR_005641817.1 | other | upstream | 597986 | 13335449 ~ 13421951 (-) | False | prkar1b |
| TU209766 | other | upstream | 1313275 | 14050738 ~ 14057312 (-) | False | med9 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| rainbow trout (Oncorhynchus mykiss) | TU1354003 | True | 1622 | lncRNA | 0.44 | 2 | NC_048577.1 | 53725772 ~ 53727760 (+) |
