RNA id: TU209766



Basic Information


Item Value
RNA id TU209766
length 350
RNA type TUCP
GC content 0.54
exon number 3
gene id med9
representative False

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14050738 ~ 14057354 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GACGTAATCTACCTGCGCCGCGGAGTAGGGAGCGTGATGGCGGTGTCTCAACCAATGCAAGACAAAGAGAGCGATGATTGCTCTTTGCTGCCTTTAGTTCATGATATTATAAAATGCATGGACAAGGACAGCCAGGATGTTCACCAAGAACTGGCCAAGCTGAAGACAAAGATCCAGGAGGCTCGGGAGCAGATATCTAACATGCCCGGGGTAGACAGCAGTCCgctggagcagcagcagcagctggctACGCTGCGGGAGCAGGATGTCCACCAAGAACTGGCCAAGCTGAAGACAAAGATCCAGGAGGCTCGGGAGTGGATATCTAACATGCCCGGGGTAGACAGCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005641993.1 lncRNA downstream 104341 13936768 ~ 13946397 (-) True LOC120575453
TU209678 lncRNA downstream 222947 13755664 ~ 13827791 (-) False G154717
TU209680 lncRNA downstream 222947 13755664 ~ 13827791 (-) False G154717
TU209682 lncRNA downstream 222947 13755664 ~ 13827791 (-) False G154717
TU209681 lncRNA downstream 222947 13783840 ~ 13827791 (-) False G154717
TU209781 lncRNA upstream 21202 14078514 ~ 14099281 (-) True G154788
TU209785 lncRNA upstream 28430 14085742 ~ 14087766 (-) True G154791
TU209820 lncRNA upstream 268661 14325973 ~ 14326936 (-) True G154825
XR_005641944.1 lncRNA upstream 273633 14330945 ~ 14337074 (-) True LOC120575037
TU209899 lncRNA upstream 397750 14455062 ~ 14457036 (-) False LOC120574967
XM_039826248.1 mRNA downstream 99982 13884337 ~ 13950756 (-) True LOC120575451
XM_039826242.1 mRNA downstream 187204 13860150 ~ 13863534 (-) False LOC120575446
XM_039826241.1 mRNA downstream 187205 13860150 ~ 13863533 (-) True LOC120575446
XM_039823951.1 mRNA downstream 286202 13757750 ~ 13764536 (-) False hmox2b
XM_039823949.1 mRNA downstream 286232 13757750 ~ 13764506 (-) True hmox2b
XM_039824745.1 mRNA upstream 42143 14099455 ~ 14106823 (-) True LOC120574465
XM_039825773.1 mRNA upstream 227862 14285174 ~ 14288819 (-) True LOC120575134
XM_039824079.1 mRNA upstream 326790 14384102 ~ 14417141 (-) False rnf213a
XM_039824077.1 mRNA upstream 326790 14384102 ~ 14417141 (-) True rnf213a
XM_039824078.1 mRNA upstream 327514 14384826 ~ 14417141 (-) False rnf213a
XR_005641817.1 other downstream 628787 13335449 ~ 13421951 (-) False prkar1b
TU209391 other downstream 1071053 12973332 ~ 12979685 (-) False sun1
XR_005641885.1 other downstream 1077928 12956522 ~ 12972810 (-) False iqck
unassigned_transcript_848 other downstream 1207764 12842893 ~ 12842974 (-) True trnal-uag_2
XR_005641884.1 other downstream 1485267 12427504 ~ 12565471 (-) False cep112
XR_005641939.1 other upstream 477659 14534971 ~ 14543992 (-) False LOC120574989
TU210021 other upstream 732744 14790056 ~ 14790778 (-) False LOC120574213
TU210042 other upstream 738714 14796026 ~ 14828220 (-) False LOC120574214
TU210040 other upstream 794627 14851939 ~ 14857557 (-) False LOC120575102
TU210041 other upstream 794627 14851939 ~ 14857557 (-) True LOC120575102

Expression Profile