RNA id: TU209785



Basic Information


Item Value
RNA id TU209785
length 329
lncRNA type inter_gene
GC content 0.44
exon number 3
gene id G154791
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14085742 ~ 14087766 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GTGATTTTCCTCCGCTTTGGATTGTGTCGTAATAATTCTAGCTCCCTCTTGGTCGGCTCCCATGTTGTGTATTTCTCCCCTATGCCTTGCAATTTCCATGCtttcctctgttcctctttgGCAATCTGCTCCATGTCTTTGTCGTATATGTAGTCttgacacacaaaacaataaattCCCCCGTATAATAAGTCTATCGCTAGATTGTGTCTCTTGTTTTTTGCGTGCTCGTGGATGTGTTTCTTCGTAAAACAGCCGAAAAAAACGCAGTAGAGACAAGAGTGGAGTCTGTTCAGGTGGGCGCCACACATGTGACAGATACACGACTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU209765 lncRNA downstream 28430 14056467 ~ 14057312 (-) False med9
XR_005641993.1 lncRNA downstream 139345 13936768 ~ 13946397 (-) True LOC120575453
TU209681 lncRNA downstream 257951 13783840 ~ 13827791 (-) False G154717
TU209677 lncRNA downstream 257951 13824962 ~ 13827791 (-) True G154717
TU209688 lncRNA downstream 309753 13774102 ~ 13775989 (-) True G154723
TU209820 lncRNA upstream 238207 14325973 ~ 14326936 (-) True G154825
XR_005641944.1 lncRNA upstream 243179 14330945 ~ 14337074 (-) True LOC120575037
TU209899 lncRNA upstream 367296 14455062 ~ 14457036 (-) False LOC120574967
TU209938 lncRNA upstream 438368 14526134 ~ 14529119 (-) False cenpx
TU209980 lncRNA upstream 539984 14627750 ~ 14664671 (-) False G154948
XM_039823816.1 mRNA downstream 28388 14056414 ~ 14057354 (-) True med9
XM_039826248.1 mRNA downstream 134986 13884337 ~ 13950756 (-) True LOC120575451
XM_039826242.1 mRNA downstream 222208 13860150 ~ 13863534 (-) False LOC120575446
XM_039826241.1 mRNA downstream 222209 13860150 ~ 13863533 (-) True LOC120575446
XM_039823950.1 mRNA downstream 323357 13757750 ~ 13762385 (-) False hmox2b
XM_039824745.1 mRNA upstream 11689 14099455 ~ 14106823 (-) True LOC120574465
XM_039825773.1 mRNA upstream 197408 14285174 ~ 14288819 (-) True LOC120575134
XM_039824079.1 mRNA upstream 296336 14384102 ~ 14417141 (-) False rnf213a
XM_039824077.1 mRNA upstream 296336 14384102 ~ 14417141 (-) True rnf213a
XM_039824078.1 mRNA upstream 297060 14384826 ~ 14417141 (-) False rnf213a
TU209766 other downstream 28430 14050738 ~ 14057312 (-) False med9
XR_005641817.1 other downstream 663791 13335449 ~ 13421951 (-) False prkar1b
TU209391 other downstream 1106057 12973332 ~ 12979685 (-) False sun1
XR_005641885.1 other downstream 1112932 12956522 ~ 12972810 (-) False iqck
unassigned_transcript_848 other downstream 1242768 12842893 ~ 12842974 (-) True trnal-uag_2
XR_005641939.1 other upstream 447205 14534971 ~ 14543992 (-) False LOC120574989
TU210021 other upstream 702290 14790056 ~ 14790778 (-) False LOC120574213
TU210042 other upstream 708260 14796026 ~ 14828220 (-) False LOC120574214
TU210040 other upstream 764173 14851939 ~ 14857557 (-) False LOC120575102
TU210041 other upstream 764173 14851939 ~ 14857557 (-) True LOC120575102

Expression Profile