RNA id: TU210082



Basic Information


Item Value
RNA id TU210082
length 246
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G155025
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14895379 ~ 14895624 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TACAATTTATACAAAAGAGCTTTATTATGTCAAAACAGTTGGACACAGTTGTACACATTGTATCCTCCGGCAGCATTATGAGGTCAGAAAAACCTCAAACAGACTGGCGACTGAATGCATGCGGTAAAAGATACCAAAAGGAAGTCCAATATTCACAATCGCAGTCCACATGTTGACATTGTAGAAGTTAGCTTCAGTGTCATGGTCAAACTGGGGACGAGCACCGAATGCCGGCATGATCCACAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU210075 lncRNA downstream 12474 14879627 ~ 14882905 (-) False ush1ga
TU209980 lncRNA downstream 230708 14627750 ~ 14664671 (-) False G154948
TU209979 lncRNA downstream 230708 14662048 ~ 14664671 (-) True G154948
TU209985 lncRNA downstream 248310 14640102 ~ 14647069 (-) True G154953
TU209984 lncRNA downstream 258577 14633178 ~ 14636802 (-) True G154952
TU210102 lncRNA upstream 67609 14963233 ~ 14963846 (-) True G155039
TU210111 lncRNA upstream 89510 14985134 ~ 14985364 (-) True G155047
TU210145 lncRNA upstream 107432 15003056 ~ 15007022 (-) False LOC120573849
TU210204 lncRNA upstream 238333 15133957 ~ 15139853 (-) False LOC120574278
TU210217 lncRNA upstream 260805 15156429 ~ 15162435 (-) True G155106
XM_039823774.1 mRNA downstream 5897 14882288 ~ 14889482 (-) True ush1ga
XM_039825829.1 mRNA downstream 20747 14869942 ~ 14874632 (-) True LOC120575176
XM_039825721.1 mRNA downstream 37799 14854129 ~ 14857580 (-) False LOC120575102
XM_039825722.1 mRNA downstream 37802 14854129 ~ 14857577 (-) False LOC120575102
XM_039824442.1 mRNA downstream 67990 14795646 ~ 14827389 (-) False LOC120574214
XM_039825668.1 mRNA upstream 41344 14936968 ~ 14950077 (-) True LOC120575070
XM_039824984.1 mRNA upstream 54640 14950264 ~ 14954273 (-) True btbd17b
XM_039824989.1 mRNA upstream 68671 14964295 ~ 14969477 (-) False ccdc137
XM_039824988.1 mRNA upstream 68671 14964295 ~ 14969235 (-) True ccdc137
XM_039823823.1 mRNA upstream 77728 14973352 ~ 14975399 (-) False LOC120573908
TU210040 other downstream 37822 14851939 ~ 14857557 (-) False LOC120575102
TU210041 other downstream 37822 14851939 ~ 14857557 (-) True LOC120575102
TU210042 other downstream 67159 14796026 ~ 14828220 (-) False LOC120574214
TU210021 other downstream 104601 14790056 ~ 14790778 (-) False LOC120574213
XR_005641939.1 other downstream 351387 14534971 ~ 14543992 (-) False LOC120574989
unassigned_transcript_852 other upstream 103149 14998773 ~ 15000144 (-) True LOC120574429
unassigned_transcript_853 other upstream 114174 15009798 ~ 15010340 (-) True LOC120573850
TU210305 other upstream 547540 15443164 ~ 15449503 (-) False metrnla
unassigned_transcript_854 other upstream 668509 15564133 ~ 15564204 (-) True trnae-cuc_25
XR_005641871.1 other upstream 822223 15717847 ~ 15724422 (-) False tecra

Expression Profile