RNA id: TU210508



Basic Information


Item Value
RNA id TU210508
length 352
RNA type TUCP
GC content 0.53
exon number 2
gene id LOC120574537
representative False

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 15741763 ~ 15745572 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gacGCCACTGACCTTTGTAGCATAAAACTGTGCGCCCAGGAGGTGGGCTCTGTGGTGGGGACGGGGGGTCTCAACCTGCTGATTAACAACGCAGGCATCATGGCCAAAGGCACTGTGCAGGAAACCAGTCCTGAGGACATGCAACATACCTTCAACACCAATGTCATGGGCCCTATGAACATGATTAAAGAGTTCCTGCCTCACCTGCGTGACGCAGTGAAGGCCAGTGGAATGCCTGGGATGTCCATCAGCAAAGCAGCCGTCGTCAACATCTCCTCACTTTTGGGTTCAATGGAAGCTTTAAAACAGTCGTATGCCTTCTGCCCTGTCGTATCCTACCGCATCAGCAAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU210486 lncRNA downstream 48117 15694773 ~ 15695558 (-) True G155298
TU210482 lncRNA downstream 52023 15682369 ~ 15691652 (-) True G155295
TU210397 lncRNA downstream 110839 15551004 ~ 15632836 (-) True G155239
TU210400 lncRNA downstream 188789 15554043 ~ 15554886 (-) True G155242
TU210389 lncRNA downstream 199658 15541557 ~ 15544017 (-) True G155234
XR_005641874.1 lncRNA upstream 78874 15822991 ~ 15825654 (-) True LOC120574547
TU210521 lncRNA upstream 79776 15823893 ~ 15825649 (-) False LOC120574547
TU210562 lncRNA upstream 146904 15891021 ~ 15891931 (-) True G155359
TU210686 lncRNA upstream 309873 16053990 ~ 16054756 (-) True G155439
TU210722 lncRNA upstream 366582 16110699 ~ 16112063 (-) True G155460
XM_039824905.1 mRNA downstream 19253 15717847 ~ 15724422 (-) True tecra
XM_039824926.1 mRNA downstream 70220 15670165 ~ 15673455 (-) False crb3a
XM_039824925.1 mRNA downstream 70220 15670165 ~ 15673455 (-) True crb3a
XM_039824836.1 mRNA downstream 79078 15662274 ~ 15664597 (-) True LOC120574497
XM_039825322.1 mRNA downstream 98053 15605503 ~ 15645622 (-) False gcgra
XM_039824851.1 mRNA upstream 2674 15746791 ~ 15788515 (-) False LOC120574502
XM_039824850.1 mRNA upstream 2674 15746791 ~ 15788515 (-) True LOC120574502
XM_039824895.1 mRNA upstream 45934 15790051 ~ 15796449 (-) True qtrt1
XM_039824920.1 mRNA upstream 89383 15833500 ~ 15837068 (-) True tmed1a
XM_039824840.1 mRNA upstream 149892 15894009 ~ 15949589 (-) True adgrl1a
XR_005641871.1 other downstream 19253 15717847 ~ 15724422 (-) False tecra
unassigned_transcript_854 other downstream 179471 15564133 ~ 15564204 (-) True trnae-cuc_25
TU210305 other downstream 294172 15443164 ~ 15449503 (-) False metrnla
unassigned_transcript_853 other downstream 733335 15009798 ~ 15010340 (-) True LOC120573850
unassigned_transcript_852 other downstream 743531 14998773 ~ 15000144 (-) True LOC120574429
TU210507 other upstream 3200 15747317 ~ 15749430 (-) False LOC120574502
TU210517 other upstream 68941 15813058 ~ 15815369 (-) True G155323
XR_005641873.1 other upstream 409670 16153787 ~ 16156067 (-) False LOC120574545
XR_005641872.1 other upstream 409670 16153787 ~ 16156067 (-) False LOC120574545
TU210689 other upstream 409734 16153851 ~ 16156027 (-) False LOC120574545

Expression Profile