RNA id: TU210780



Basic Information


Item Value
RNA id TU210780
length 352
lncRNA type inter_gene
GC content 0.49
exon number 3
gene id G155507
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 16279491 ~ 16280224 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GTGTGGCTGGTGTACTTCTGCTGGGTTGTAAAGAGCAGCGTTGCTCTTCCATACGTCCATCTTGTGCATGACTTATCATTTTTAAGAACTGCTCCTCTTCAGCTGGAGATGCCTCCTGCTGATGTTGTTCAGGTTTGGCACGGATATCAGAGGACGACCATTGGGGAGGTTTATCAGATGTGTCTGATTTGGGATGCTCTTTGCGTTGAGTAAATGGGGTCCCCACATTTTGGAGGATTTGGGGTGCAGAACATCTCTGTTCATCCATCCTTGAGCCCTGGACTTTGGAGACCATGGAACACAAGTAGCTTGCATCCATCTCTGCAGCGGTTGATGTTGATGTGGTACCTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU210771 lncRNA downstream 17461 16259819 ~ 16262030 (-) True G155500
TU210762 lncRNA downstream 56241 16204528 ~ 16223250 (-) True G155493
TU210743 lncRNA downstream 107186 16170923 ~ 16172305 (-) True G155481
TU210724 lncRNA downstream 160999 16117119 ~ 16118492 (-) True G155462
TU210723 lncRNA downstream 163969 16115108 ~ 16115522 (-) True G155461
TU210781 lncRNA upstream 159 16280383 ~ 16281568 (-) True G155508
TU210786 lncRNA upstream 20323 16300547 ~ 16300761 (-) True G155512
TU210807 lncRNA upstream 85778 16366002 ~ 16366852 (-) True G155532
TU210880 lncRNA upstream 341642 16621866 ~ 16623280 (-) False angptl6
TU210927 lncRNA upstream 424311 16704535 ~ 16725040 (-) True G155619
XM_039824691.1 mRNA downstream 34066 16230459 ~ 16245425 (-) True LOC120574432
XM_039824690.1 mRNA downstream 49634 16221359 ~ 16229857 (-) True brd4
XM_039824890.1 mRNA downstream 64098 16208250 ~ 16215393 (-) True lpar2a
XM_039824839.1 mRNA upstream 2656 16282880 ~ 16296424 (-) True LOC120574499
XM_039824884.1 mRNA upstream 60870 16341094 ~ 16344963 (-) True nr5a5
XM_039824922.1 mRNA upstream 66154 16346378 ~ 16348909 (-) True soul5
XM_039824838.1 mRNA upstream 88382 16368606 ~ 16397486 (-) True notch3
XM_039825838.1 mRNA upstream 153399 16433623 ~ 16439841 (-) True rdh8a
TU210768 other downstream 20466 16230784 ~ 16259025 (-) False LOC120574432
TU210769 other downstream 34160 16230784 ~ 16245331 (-) False LOC120574432
XR_005641873.1 other downstream 123424 16153787 ~ 16156067 (-) False LOC120574545
TU210878 other upstream 289222 16569446 ~ 16642131 (-) True G155583
TU211128 other upstream 752825 17033049 ~ 17035018 (-) False polr3k
TU211291 other upstream 1135301 17415525 ~ 17415841 (-) True G155888
unassigned_transcript_855 other upstream 1466362 17746586 ~ 17746657 (-) True trnat-cgu
TU211468 other upstream 1739787 18020011 ~ 18022964 (-) False psmg3

Expression Profile