RNA id: TU211128



Basic Information


Item Value
RNA id TU211128
length 667
RNA type TUCP
GC content 0.42
exon number 3
gene id polr3k
representative False

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 17032985 ~ 17035040 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TGCTCCACATGCACCAAACTGTGTACGCCACGGAGGCTTGTTGGAACAGTTTACTAGCTGGGTGAAATAGAGTACTCCTATTGAGTTAGTTGTTTTAGTTTGTAGCTGTTAGCTACATATATATCCCGGGTAACATGCTTCTTTTTTGTCCAACTTGCGGAAATGTTTTAATTGTTGAGGAAGGACAGAAGTGCATGAGATTCGCCTGCAACACCTGTCCGTATGTACACAACATCACAAGAAAGGTAAATAGCAGAAAGTATCCCAAGCTGAAAGAGGTGGATGATGTTCTTGGTGGCGCTGCAGCTTGGGAAAACGTGGACTCAACTGCTGAAACCTGTCCCAAGTGTGGGCATCTTCGGGCATATTTCATGCAGATTCAGACCAGATCAGCTGATGAACCTATGACAACTTTCTACAAATGCTGCAATGCTCAGTGTGGACACCGATGGAGAGACTGAAACCTTTGCACTTTGAAAATTGTAACGTATTTAATACTTCTGTGGCAAAGATACTCCCATCATATCAATTTTGAGCCCATATTTCATTCCAACATGCTTGTGTAGTTATGGGCGTTCTTCTGTCTAGGCTCTGCAGTTTCTTTTCTCTGCATAGGCCCAGTTGAAGGAACTTgaatttctttttgtgtttgcagatgatatttaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU211137 lncRNA downstream 15270 17013704 ~ 17017779 (-) False mgrn1b
TU211120 lncRNA downstream 64966 16967793 ~ 16968083 (-) True G155759
TU211077 lncRNA downstream 121970 16910274 ~ 16911079 (-) True G155722
TU211033 lncRNA downstream 192762 16839035 ~ 16840287 (-) True G155697
TU211032 lncRNA downstream 194332 16836993 ~ 16838717 (-) True G155696
TU211140 lncRNA upstream 2160 17037178 ~ 17037710 (-) True G155775
TU211184 lncRNA upstream 82254 17117272 ~ 17117596 (-) True G155796
TU211187 lncRNA upstream 89172 17124190 ~ 17124481 (-) True G155799
TU211210 lncRNA upstream 101801 17136819 ~ 17137082 (-) True G155820
TU211218 lncRNA upstream 103492 17138510 ~ 17138824 (-) True G155825
XM_039825356.1 mRNA downstream 9841 17012411 ~ 17023208 (-) False mgrn1b
XM_039825357.1 mRNA downstream 9841 17012411 ~ 17023208 (-) True mgrn1b
XM_039823848.1 mRNA downstream 27505 17004147 ~ 17005544 (-) True aanat2
XM_039823705.1 mRNA downstream 69083 16961440 ~ 16963966 (-) True mpg
XM_039824188.1 mRNA downstream 92859 16939320 ~ 16940190 (-) True LOC120574104
XM_039824966.1 mRNA upstream 7430 17042448 ~ 17087280 (-) False mrtfbb
XM_039824967.1 mRNA upstream 7430 17042448 ~ 17056607 (-) False mrtfbb
XM_039824965.1 mRNA upstream 7430 17042448 ~ 17056607 (-) True mrtfbb
XM_039824964.1 mRNA upstream 7430 17042448 ~ 17056490 (-) False mrtfbb
XM_039824492.1 mRNA upstream 111497 17146515 ~ 17162165 (-) False unkl
TU210878 other downstream 390918 16569446 ~ 16642131 (-) True G155583
TU210768 other downstream 774024 16230784 ~ 16259025 (-) False LOC120574432
TU210769 other downstream 787718 16230784 ~ 16245331 (-) False LOC120574432
XR_005641873.1 other downstream 876982 16153787 ~ 16156067 (-) False LOC120574545
TU211291 other upstream 380507 17415525 ~ 17415841 (-) True G155888
unassigned_transcript_855 other upstream 711568 17746586 ~ 17746657 (-) True trnat-cgu
TU211468 other upstream 984993 18020011 ~ 18022964 (-) False psmg3
XR_005642010.1 other upstream 1317743 18352761 ~ 18352844 (-) True LOC120575519
XR_005642009.1 other upstream 1318345 18353363 ~ 18353446 (-) True LOC120575518

Expression Profile