Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039823772.1 |
| length | 3422 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 3 |
| gene id | gper1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053126.1 |
| NCBI id | CM020923.1 |
| chromosome length | 38831509 |
| location | 17165482 ~ 17173284 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:1900194 | negative regulation of oocyte maturation | biological_process |
| GO:0045745 | positive regulation of G protein-coupled receptor signaling pathway | biological_process |
| GO:0006915 | apoptotic process | biological_process |
| GO:0051447 | negative regulation of meiotic cell cycle | biological_process |
| GO:0071371 | cellular response to gonadotropin stimulus | biological_process |
| GO:0043401 | steroid hormone mediated signaling pathway | biological_process |
| GO:0071392 | cellular response to estradiol stimulus | biological_process |
| GO:0030819 | obsolete positive regulation of cAMP biosynthetic process | biological_process |
| GO:0007399 | nervous system development | biological_process |
| GO:0048471 | perinuclear region of cytoplasm | cellular_component |
| GO:0032591 | dendritic spine membrane | cellular_component |
| GO:0005769 | early endosome | cellular_component |
| GO:0005789 | endoplasmic reticulum membrane | cellular_component |
| GO:0030424 | axon | cellular_component |
| GO:0055037 | recycling endosome | cellular_component |
| GO:0000139 | Golgi membrane | cellular_component |
| GO:0045211 | postsynaptic membrane | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0031966 | mitochondrial membrane | cellular_component |
| GO:0014069 | postsynaptic density | cellular_component |
| GO:0030054 | cell junction | cellular_component |
| GO:0016323 | basolateral plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0030659 | cytoplasmic vesicle membrane | cellular_component |
| GO:0005496 | steroid binding | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0030284 | estrogen receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU211217 | lncRNA | downstream | 16489 | 17146108 ~ 17148993 (-) | False | unkl |
| TU211218 | lncRNA | downstream | 26658 | 17138510 ~ 17138824 (-) | True | G155825 |
| TU211210 | lncRNA | downstream | 28400 | 17136819 ~ 17137082 (-) | True | G155820 |
| TU211187 | lncRNA | downstream | 41001 | 17124190 ~ 17124481 (-) | True | G155799 |
| TU211184 | lncRNA | downstream | 47886 | 17117272 ~ 17117596 (-) | True | G155796 |
| TU211228 | lncRNA | upstream | 3405 | 17176393 ~ 17176728 (-) | True | G155835 |
| TU211231 | lncRNA | upstream | 7020 | 17180008 ~ 17180211 (-) | True | G155838 |
| TU211248 | lncRNA | upstream | 88132 | 17261120 ~ 17265305 (-) | False | baiap3 |
| TU211263 | lncRNA | upstream | 103150 | 17276138 ~ 17276676 (-) | True | G155864 |
| TU211264 | lncRNA | upstream | 104726 | 17277714 ~ 17278122 (-) | True | G155865 |
| XM_039824492.1 | mRNA | downstream | 3317 | 17146515 ~ 17162165 (-) | False | unkl |
| XM_039824490.1 | mRNA | downstream | 3317 | 17146515 ~ 17162165 (-) | False | unkl |
| XM_039824491.1 | mRNA | downstream | 3317 | 17146515 ~ 17162165 (-) | False | unkl |
| XM_039824489.1 | mRNA | downstream | 3317 | 17146515 ~ 17162165 (-) | True | unkl |
| XM_039824964.1 | mRNA | downstream | 108992 | 17042448 ~ 17056490 (-) | False | mrtfbb |
| XM_039825179.1 | mRNA | upstream | 8906 | 17181894 ~ 17192994 (-) | True | gpr146 |
| XM_039825940.1 | mRNA | upstream | 54145 | 17227133 ~ 17265299 (-) | True | baiap3 |
| XM_039823884.1 | mRNA | upstream | 153083 | 17326071 ~ 17347543 (-) | True | hs3st2 |
| XM_039824006.1 | mRNA | upstream | 523989 | 17696977 ~ 17706966 (-) | True | LOC120574020 |
| XM_039824013.1 | mRNA | upstream | 546476 | 17719464 ~ 17733285 (-) | False | zc3h7a |
| TU211128 | other | downstream | 130464 | 17033049 ~ 17035018 (-) | False | polr3k |
| TU210878 | other | downstream | 523351 | 16569446 ~ 16642131 (-) | True | G155583 |
| TU210768 | other | downstream | 906457 | 16230784 ~ 16259025 (-) | False | LOC120574432 |
| TU210769 | other | downstream | 920151 | 16230784 ~ 16245331 (-) | False | LOC120574432 |
| TU210688 | other | downstream | 1009455 | 16154181 ~ 16156027 (-) | False | LOC120574545 |
| TU211291 | other | upstream | 242537 | 17415525 ~ 17415841 (-) | True | G155888 |
| unassigned_transcript_855 | other | upstream | 573598 | 17746586 ~ 17746657 (-) | True | trnat-cgu |
| TU211468 | other | upstream | 847023 | 18020011 ~ 18022964 (-) | False | psmg3 |
| XR_005642010.1 | other | upstream | 1179773 | 18352761 ~ 18352844 (-) | True | LOC120575519 |
| XR_005642009.1 | other | upstream | 1180375 | 18353363 ~ 18353446 (-) | True | LOC120575518 |
