RNA id: TU211291



Basic Information


Item Value
RNA id TU211291
length 317
RNA type TUCP
GC content 0.55
exon number 1
gene id G155888
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 17415525 ~ 17415841 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TTCCTGTCAAAGAAATGTGGCTCATTTCCAACGGCTCTGACGTCCGGGTGCACCCTGAGAGCCTCCAGCAGGGCTCTAGTCCCCCCTTTCTTCACCCCGATGATGATGGCTTGGGGAAGTTTCTTCTCTCCGTAATCCATGGTGCAGTTCACCCTGAGttcgctgtccgtggtgctgaattCCTGATGCTCCTTCTCCACCGCGGTGTTGTGATACGCCGCCGCCAATTTAGTTGGAGACGCCTGAGTCCTAATCCATTCCACTGTCCTTTGTTCGGCCTCAGCATGATCCTTTACGGTGGAAACCGCGGTGGTTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU211290 lncRNA downstream 175 17415106 ~ 17415350 (-) True G155887
TU211270 lncRNA downstream 123259 17290294 ~ 17292266 (-) True G155870
TU211271 lncRNA downstream 123395 17290254 ~ 17292130 (-) False G155870
TU211269 lncRNA downstream 123395 17290294 ~ 17292130 (-) False G155870
TU211266 lncRNA downstream 132821 17282440 ~ 17282704 (-) True G155867
TU211293 lncRNA upstream 85753 17501594 ~ 17502282 (-) True G155890
TU211294 lncRNA upstream 86814 17502655 ~ 17503193 (-) True G155891
TU211303 lncRNA upstream 156392 17572233 ~ 17572560 (-) True G155900
TU211311 lncRNA upstream 195927 17611768 ~ 17612032 (-) True G155907
TU211365 lncRNA upstream 280484 17696325 ~ 17768484 (-) True G155941
XM_039823884.1 mRNA downstream 67982 17326071 ~ 17347543 (-) True hs3st2
XM_039825940.1 mRNA downstream 150226 17227133 ~ 17265299 (-) True baiap3
XM_039825179.1 mRNA downstream 222531 17181894 ~ 17192994 (-) True gpr146
XM_039823771.1 mRNA downstream 242241 17165482 ~ 17173284 (-) False gper1
XM_039823769.1 mRNA downstream 242537 17165482 ~ 17172988 (-) False gper1
XM_039824006.1 mRNA upstream 281136 17696977 ~ 17706966 (-) True LOC120574020
XM_039824013.1 mRNA upstream 303623 17719464 ~ 17733285 (-) False zc3h7a
XM_039824012.1 mRNA upstream 303623 17719464 ~ 17733284 (-) True zc3h7a
XM_039823716.1 mRNA upstream 380488 17796329 ~ 17811422 (-) False galr2b
XM_039823714.1 mRNA upstream 380488 17796329 ~ 17811422 (-) False galr2b
TU211128 other downstream 380507 17033049 ~ 17035018 (-) False polr3k
TU210878 other downstream 773394 16569446 ~ 16642131 (-) True G155583
TU210768 other downstream 1156500 16230784 ~ 16259025 (-) False LOC120574432
TU210769 other downstream 1170194 16230784 ~ 16245331 (-) False LOC120574432
TU210689 other downstream 1259498 16153851 ~ 16156027 (-) False LOC120574545
unassigned_transcript_855 other upstream 330745 17746586 ~ 17746657 (-) True trnat-cgu
TU211468 other upstream 604170 18020011 ~ 18022964 (-) False psmg3
XR_005642010.1 other upstream 936920 18352761 ~ 18352844 (-) True LOC120575519
XR_005642009.1 other upstream 937522 18353363 ~ 18353446 (-) True LOC120575518
XR_005642008.1 other upstream 938241 18354082 ~ 18354165 (-) True LOC120575517

Expression Profile