RNA id: TU211365



Basic Information


Item Value
RNA id TU211365
length 509
lncRNA type read_through
GC content 0.35
exon number 2
gene id G155941
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 17696325 ~ 17768484 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ggtcgaaacgttcaagggggccgaatactttcgcaaggcactgtacatctGGATAACATTTAAACTCAAAATAGGATTTGAATTGTTGCAAGAACTGAAACTGAGTTGCCtgaagaaaacatttaaatagcaTTACATGGTTGTCAATCAGCCTGGATCGTACCTTGCACTGTCTGTTCTAATAAGCCAACACTACACAGTATCATTGTTAATCATTAACATATTGTTTTCTACTGCACTGCTAAACAAAAATAACCACTCACCTTATCTCACACTTATTTGCATTGCTTCCAGCTCAGGTTTGTTATTAAGGTACTGTTGTTGGAAATATGTGATGTATCTAAAACTGTTATTTTTAAGGCTGTTCATAGTTTGTCAGAATGATTGACAGTTTGATAAAAAATAGATGAGAGAAAATAATGCAATATGGTATCGTCAACTAATTAATGCCTGACAATCATTGTTCTTAACGTGTTTTGTAAATTTTGCATATTGTCAGTGTTTTTCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU211311 lncRNA downstream 84293 17611768 ~ 17612032 (-) True G155907
TU211303 lncRNA downstream 123765 17572233 ~ 17572560 (-) True G155900
TU211294 lncRNA downstream 193132 17502655 ~ 17503193 (-) True G155891
TU211293 lncRNA downstream 194043 17501594 ~ 17502282 (-) True G155890
TU211290 lncRNA downstream 280975 17415106 ~ 17415350 (-) True G155887
TU211418 lncRNA upstream 165103 17933587 ~ 17936401 (-) False micall2a
TU211471 lncRNA upstream 214998 17983482 ~ 17983693 (-) True G156026
XR_005641821.1 lncRNA upstream 219296 17987780 ~ 17992027 (-) True LOC120574111
XR_005641822.1 lncRNA upstream 219296 17987780 ~ 17992022 (-) False LOC120574111
TU211508 lncRNA upstream 367606 18136090 ~ 18139609 (-) True LOC120574888
XM_039823884.1 mRNA downstream 348782 17326071 ~ 17347543 (-) True hs3st2
XM_039825940.1 mRNA downstream 431026 17227133 ~ 17265299 (-) True baiap3
XM_039825179.1 mRNA downstream 503331 17181894 ~ 17192994 (-) True gpr146
XM_039823772.1 mRNA downstream 523337 17165482 ~ 17172988 (-) False gper1
XM_039823716.1 mRNA upstream 27845 17796329 ~ 17811422 (-) False galr2b
XM_039823714.1 mRNA upstream 27845 17796329 ~ 17811422 (-) False galr2b
XM_039823715.1 mRNA upstream 27845 17796329 ~ 17811422 (-) True galr2b
XM_039826199.1 mRNA upstream 67990 17836474 ~ 17840960 (-) False zfand2a
XM_039826200.1 mRNA upstream 67990 17836474 ~ 17840960 (-) True zfand2a
TU211291 other downstream 280484 17415525 ~ 17415841 (-) True G155888
TU211128 other downstream 661307 17033049 ~ 17035018 (-) False polr3k
TU210878 other downstream 1054194 16569446 ~ 16642131 (-) True G155583
TU210768 other downstream 1437300 16230784 ~ 16259025 (-) False LOC120574432
TU211468 other upstream 251527 18020011 ~ 18022964 (-) False psmg3
XR_005642010.1 other upstream 584277 18352761 ~ 18352844 (-) True LOC120575519
XR_005642009.1 other upstream 584879 18353363 ~ 18353446 (-) True LOC120575518
XR_005642008.1 other upstream 585598 18354082 ~ 18354165 (-) True LOC120575517
TU211888 other upstream 1340415 19108899 ~ 19120932 (-) True G156321

Expression Profile