RNA id: TU212344



Basic Information


Item Value
RNA id TU212344
length 332
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G156658
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 20242255 ~ 20242586 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CGTGGTTCTCAGAGTAGGGTGGTATTCCAACAAGGCAAAAAGCAACTCCATTCATTGGACAACAGAAATTGTTCGGCTGCAACAAGGAGAGGCAGATTTGTTGCTGCACGAGCGGTGAACAGAACTGAAGCTGCTCCGAGAGTAACAATGCTGCGGTCAAACACAAACTTATATGTTCAACACGTATCCAGCTTCCTTCCTTCTAAAAAACCCACTCTGTTCCCGTTGTTTCGGGCCTTTCAATGTGCTAACcccctcctcatcctcttctttttcttcttccgcCAGACCGCATCAGTTGTACAGAACTAAATCCCTCTGCGCTCCTCGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU212331 lncRNA downstream 27328 20203511 ~ 20214927 (-) True G156645
TU212318 lncRNA downstream 54561 20187136 ~ 20187694 (-) True G156635
TU212314 lncRNA downstream 67792 20173498 ~ 20174463 (-) True G156631
TU212254 lncRNA downstream 269752 19968932 ~ 19972503 (-) True G156595
TU212210 lncRNA downstream 289273 19950391 ~ 19952982 (-) True G156567
TU212359 lncRNA upstream 56475 20299061 ~ 20300934 (-) False hexim1
TU212371 lncRNA upstream 81323 20323909 ~ 20324231 (-) True G156684
TU212381 lncRNA upstream 92226 20334812 ~ 20338081 (-) True G156693
TU212384 lncRNA upstream 96464 20339050 ~ 20340458 (-) True G156695
TU212388 lncRNA upstream 99277 20341863 ~ 20344917 (-) True G156698
XM_039825826.1 mRNA downstream 116286 20122436 ~ 20125969 (-) True rpl19
XM_039825982.1 mRNA downstream 128810 20102040 ~ 20113445 (-) True st8sia6
XM_039825965.1 mRNA downstream 163238 20047157 ~ 20079017 (-) True LOC120575253
XM_039823886.1 mRNA downstream 294334 19941967 ~ 19947921 (-) False si:busm1-163l24.3
XM_039824001.1 mRNA upstream 56438 20299024 ~ 20300946 (-) True hexim1
XM_039824781.1 mRNA upstream 135515 20378101 ~ 20384616 (-) True tmem98
XM_039824782.1 mRNA upstream 135515 20378101 ~ 20382513 (-) False tmem98
XM_039824562.1 mRNA upstream 238913 20481499 ~ 20496994 (-) True kcnj19a
XM_039824458.1 mRNA upstream 374877 20617463 ~ 21031879 (-) False asic2
unassigned_transcript_860 other downstream 70897 20171287 ~ 20171358 (-) True trnac-gca_27
unassigned_transcript_859 other downstream 221967 20020217 ~ 20020288 (-) True trnac-gca_26
TU212205 other downstream 294365 19945588 ~ 19947890 (-) False si:busm1-163l24.3
TU212206 other downstream 294365 19945588 ~ 19947890 (-) False si:busm1-163l24.3
TU211982 other downstream 990999 19249726 ~ 19251256 (-) True G156396
TU212545 other upstream 826440 21069026 ~ 21071488 (-) False atxn7l3a
TU212733 other upstream 1220636 21463222 ~ 21465073 (-) False ndufa4a
unassigned_transcript_864 other upstream 1361779 21604365 ~ 21604436 (-) True trnac-gca_31
TU212812 other upstream 1378444 21621030 ~ 21622961 (-) True G157034
TU212878 other upstream 1472459 21715045 ~ 21718696 (-) False LOC120574354

Expression Profile