RNA id: TU212545



Basic Information


Item Value
RNA id TU212545
length 701
RNA type TUCP
GC content 0.48
exon number 9
gene id atxn7l3a
representative False

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 21064760 ~ 21071507 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AGGCCTTGGTCCATGACATCTACTCTGAGCTGGTGGAAGATGCCTGTTTGGGCCTGTGTTTCGAGGTTCACCGTGCTGTGAAACAGGGCTATTTCTTCTTGGATGAAACGGACCAAGAGAGCATGAAGGAGTTTGAAATAGTGGATCAGCCAGGTGTTGACATATTTGGCCAGGTGTACAATCAGTGGAAAAACAAAGAGTGTGAATGCCCGAACTGCAAAAGATTGATAGCAGCTTCTCGCTTCGCCCCGCACTTGGAGAAATGTCTCGGCATGGGACGCAACAGCAGTCGCATCGCCAACCGCAGACTAGCCAGCAACAATAACATGAGCAAATCAGAGAGTGATCAGGAAGACAATGATGACCTCAATGATAACGACTGGTCGTACggtgcagaaaaaaaagCCAAAAAGAGAAAGTCAGATAAgAATCAAAATTCCCCAAGAAGACCCAAAtctctaaaacataaaaatgGTGAGCTTGGGAGCAGCGTCAGTTCAGAGCCTTACAAGTACAACTATAACACTGGCATCAGTTATGAAACTTTAGGCCCCGATGAAGTCCGATCCCTTTTAACAACGCAATGTGGGGTGATCTCTGAGCACACCAAGAAGATGTGTACCAGGTCTCATCGATGTCCCCAGCACACGGACGAACAGAGGAGGGCCGTCAGGCTGTTCCTTCTGGGGTCAGTCCGCGtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU212556 lncRNA downstream 13124 21055689 ~ 21055902 (-) True G156834
TU212388 lncRNA downstream 724109 20341863 ~ 20344917 (-) True G156698
TU212384 lncRNA downstream 728568 20339050 ~ 20340458 (-) True G156695
TU212381 lncRNA downstream 730945 20334812 ~ 20338081 (-) True G156693
TU212371 lncRNA downstream 744795 20323909 ~ 20324231 (-) True G156684
TU212546 lncRNA upstream 386 21071874 ~ 21073285 (-) True G156825
TU212564 lncRNA upstream 34372 21105860 ~ 21108778 (-) True selenow2a
XR_005641952.1 lncRNA upstream 98716 21170204 ~ 21253564 (-) True LOC120575152
TU212672 lncRNA upstream 252749 21324237 ~ 21324495 (-) True G156932
TU212674 lncRNA upstream 254626 21326114 ~ 21326401 (-) True G156934
XM_039826081.1 mRNA downstream 18419 21038105 ~ 21050607 (-) True hrob
XM_039824458.1 mRNA downstream 37147 20617463 ~ 21031879 (-) False asic2
XM_039824457.1 mRNA downstream 39019 20617463 ~ 21030007 (-) False asic2
XM_039824456.1 mRNA downstream 327584 20617463 ~ 20741442 (-) True asic2
XM_039824562.1 mRNA downstream 572032 20481499 ~ 20496994 (-) True kcnj19a
XM_039825304.1 mRNA upstream 3095 21074583 ~ 21085215 (-) False ubtf
XM_039825301.1 mRNA upstream 3095 21074583 ~ 21085068 (-) False ubtf
XM_039825303.1 mRNA upstream 3095 21074583 ~ 21084943 (-) False ubtf
XM_039825297.1 mRNA upstream 3095 21074583 ~ 21084943 (-) False ubtf
XM_039825302.1 mRNA upstream 3095 21074583 ~ 21084942 (-) False ubtf
unassigned_transcript_860 other downstream 897668 20171287 ~ 20171358 (-) True trnac-gca_27
unassigned_transcript_859 other downstream 1048738 20020217 ~ 20020288 (-) True trnac-gca_26
TU212205 other downstream 1121136 19945588 ~ 19947890 (-) False si:busm1-163l24.3
TU212206 other downstream 1121136 19945588 ~ 19947890 (-) False si:busm1-163l24.3
TU211982 other downstream 1817770 19249726 ~ 19251256 (-) True G156396
TU212733 other upstream 391734 21463222 ~ 21465073 (-) False ndufa4a
unassigned_transcript_864 other upstream 532877 21604365 ~ 21604436 (-) True trnac-gca_31
TU212812 other upstream 549542 21621030 ~ 21622961 (-) True G157034
TU212878 other upstream 643557 21715045 ~ 21718696 (-) False LOC120574354
TU212889 other upstream 662894 21734382 ~ 21740703 (-) True G157096

Expression Profile