RNA id: XM_039823715.1


Basic Information

Item Value
RNA id XM_039823715.1
length 3133
RNA type mRNA
GC content 0.42
exon number 4
gene id galr2b
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 17796329 ~ 17811422 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GAAGAGAGGCTTCGGTGTAAAGAGTATGAGCATCTTAACAGAGCAGGTCTGCTGGGAGTCTCGCTCCTAATCTGAGAGGAAGCTTTGGATACTGTCCACCCATCATCAGCCTGGCTGCTTATTGCTGAGATTTGAGGAATGAGTATGAAAACGTATGAAAGCCTGAGGAGGACTTCACTACATATCAGTTTTTAATGaattgcaaaatgtctgactttgagGATTTCAGTAAGCCAGGAGGGCAGGCGAATGTATCTGAAAGCTACCAGCTGAACCCCACCAGTGTGATTGTGTCAGTGGTCTTCTCCCTCATCTTCCTGCTGGGCACCATCGGCAACAGCCTGGTGCTCGCTGTGGTTCTGCGGAGCGGGCAGTTGGGATACAACACAACCAATCTGTTCATACTCAACCTGAGCGTGGCCGACttcttcttcatcatcttctgcGTTCCTTTCCAAGCCACCATCTACTCTCTGGAGGGCTGGGTGTTTGGTTCCTTTATGTGCAAAGTGGTCCACTTCTTCATCAACCTCACCATGTATGCCAGCAGCTTCACACTCGCTGCTGTCTCTGTTGACAGGTATCTGGCCATTCGTTACCCGCTGCGCTCCAGAGAGCTACGGACCCCGTGTAACGCAGTGGTTGCCATGGTGATAATCTGGGGTCTCTCTCTGGTTTTTGCGGGTCCTTATCTCAGCTACTACGACCTCATCGATTACGCCAACAGTACAGTGTGCATCCCTGGCTGGGAGGAGCAGAACAGGAAGGTGCTGGACACGTGCACCTTCCTGGTCGGCTACGTCATCCCCGTGTTGATTGTGAGTCTCTCGTACACTCGAACCATCAAGTATCTGTGGACGGCTGTCGACCCTCTGGACGGCATGTCCGAATCCAAGAGGGCCAAACGCAAAGTCACCAAAATGATCATCATTGTCACTGTGCTTTTCTGCATCTGCTGGCTGCCGTACCATGTGGTGATCTTGTGCTACCTGTACGGAGACTTTCCTTTCAATCAGACCACCTATGCCTTCAGGCTTCTCTCTCACTGCATGGCCTACGCCAACTCTTGTGTCAACCCCATCGTGTACGCTCTGGTGTCCAAGCATTTTCGGAAAGGCTTCAAGAAAGTGTTCAGCTGCATCCTCAGTAAAAATGGGAGAAATAAGGTCCATGTGGTTCATGTAGCCAACACTGTGCCCGGGTTTGAAGCAGGCTCCACTGAGGTGTCGCAGATGAACGAGGAGAACGTACGACAGAATGAGTGTGAAATGATAAACAGGCGGATTGTAGAGCCAAGAGAAGCCacagtgacactgaatttgccATTTCAGCGGCAGACTTGACAAGTGATTCAGCTTTGCTGACAGGCTCAGTGCAGATTGCCTTATGCGAAAGACATTACAGCTACTAGAAATGTGTTAACTTCTCATCATGACATTCACAGTTTTGGCGGCAAAGAGGAGATGAGCTCAAATGAAACATGAAGCAttcatttgcaaaaacagaTATCTCCgtttttagttattttacaAAATCATGTTATTTTGTGTTCGATCCAGGAAATATCATTACAAATTGGTATCAGGTTGTTTTGATAAGAGAGCTcaattttttcataaatcacttttttttattgtgcactCAAGGGAATATCAATCAAACTAGTGTTGGTTCATTCATtttttagaatggcttttatcCATTTTTAACAAATGAACTCTTCATAGTTACGCAGATAAATAGTGTTAATGTGTATACGGTGAGTCCACaaccaaaaatgtgtttgtttcatCATTTTTGTCAAGTACTTACTCCGATAATGCTCCATTAACAGATATACACAGTCAGAAAGGTTTGTTAGTTGTGTTAAAAGTGAAAAATTCTCAGTATTTTCTGTTTCCACCATTTGCCTTAACCATAGCCTGCACTTTGGtgtttatttctattttcatAAGCATTTCAGAATCTACATGATTCCAGCACTCTTTAAGAGCAGCACAGAATGTTGGGTGTATTTCCAACACCATGTTTGACTGTAGCTCATATGTTCTTATGTAGTCTTTTCCTCACATAAACTCAGCTGCAAATGCAATCTTCACAGTCAGATTTGGACTAGTTTTGAAAGCGTTAAGCTGCATCTCACAacccttaaattgcctcctcaaTTCCTCCACTTGCCActttcctcgcgtcttagtcccacccaccgaggaagcatggaaggagagaggcaacgagcaaatgtgttttagagagatgagacgtcctttcttTTGAAGCGTCTCATAAATTGggagcaactccttcagctgcatgGCTTCTGGTaaggctgctcttgtgtatccTTGCTCATGGCTCCTtcggtgatccctcctcgatgctcgctcctcggTCCTTtgggcaggaataagagctttgagaagACAGAACAACAAGTTTAAATACTGGTATATTtaaatgatatactgtatgttaaaaaaaaaaactctcagaaAAGTATGTGCAAACATGATATTCAGTTATATTTCAATTTCGTACCAGCATTTAAAATCTATAAATTTTGATTGGAATACATTCTGGTGTAAGAAAAAGTTTAAGAATCAGGTGTCAAAATACATTTGGTAAGAGCTTTATAAGTAGttgataaatatttaaaaattctTGGTAAAAGACTCAAGTCTTCTTGGACCCCTACTAGAAAACTGGACATATTTTCTTGCTTTACTTGTATTTTGCAATGATTGTAGTCATGGCATGTTTCTCTTTGGTGTAAAATATGATATACTTAAATTAATATGTTTATCAATGAGTGCACTTACAGTAAGCAATTAAGAGTTATGTATTTTAAAGGtgtgtattttatgtatttatattctTCAGTATCTCTCTCTGTTGTGTCCTACTTTAGAGCTGTACAGAGAAAAGCTTACATGTGTTTTAGCTGTGTTCGGTTCTGATTATGTAAGATGCAATTTTCCTCTTGAGAGACTCATTTCCAGACAGAACATTCTCCTTTGCACTGACCAATTTTCCTCCAGTTTGTTTTCTGTGATTTTGCCCGTTGCATCTTAATGTGTAtacattatttttctgtttgttctGTTTCATCATTTTGACTTTCAAACGTAACCGC

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU211365 lncRNA downstream 27845 17696325 ~ 17768484 (-) True G155941
TU211366 lncRNA downstream 80628 17712807 ~ 17715701 (-) True G155942
TU211368 lncRNA downstream 82478 17712807 ~ 17713851 (-) False G155942
TU211311 lncRNA downstream 184297 17611768 ~ 17612032 (-) True G155907
TU211303 lncRNA downstream 223769 17572233 ~ 17572560 (-) True G155900
TU211418 lncRNA upstream 122165 17933587 ~ 17936401 (-) False micall2a
TU211471 lncRNA upstream 172060 17983482 ~ 17983693 (-) True G156026
XR_005641821.1 lncRNA upstream 176358 17987780 ~ 17992027 (-) True LOC120574111
XR_005641822.1 lncRNA upstream 176358 17987780 ~ 17992022 (-) False LOC120574111
TU211508 lncRNA upstream 324668 18136090 ~ 18139609 (-) True LOC120574888
XM_039824013.1 mRNA downstream 63044 17719464 ~ 17733285 (-) False zc3h7a
XM_039824012.1 mRNA downstream 63045 17719464 ~ 17733284 (-) True zc3h7a
XM_039824006.1 mRNA downstream 89363 17696977 ~ 17706966 (-) True LOC120574020
XM_039823884.1 mRNA downstream 448786 17326071 ~ 17347543 (-) True hs3st2
XM_039825940.1 mRNA downstream 531030 17227133 ~ 17265299 (-) True baiap3
XM_039826199.1 mRNA upstream 25052 17836474 ~ 17840960 (-) False zfand2a
XM_039826200.1 mRNA upstream 25052 17836474 ~ 17840960 (-) True zfand2a
XM_039824697.1 mRNA upstream 122146 17933568 ~ 17945535 (-) True micall2a
XM_039824698.1 mRNA upstream 137335 17948757 ~ 17952475 (-) True si:dkey-43p13.5
XM_039825125.1 mRNA upstream 150171 17961593 ~ 17980982 (-) False ints1
unassigned_transcript_855 other downstream 49672 17746586 ~ 17746657 (-) True trnat-cgu
TU211291 other downstream 380488 17415525 ~ 17415841 (-) True G155888
TU211128 other downstream 761311 17033049 ~ 17035018 (-) False polr3k
TU210878 other downstream 1154198 16569446 ~ 16642131 (-) True G155583
TU210769 other downstream 1550998 16230784 ~ 16245331 (-) False LOC120574432
TU211468 other upstream 208589 18020011 ~ 18022964 (-) False psmg3
XR_005642010.1 other upstream 541339 18352761 ~ 18352844 (-) True LOC120575519
XR_005642009.1 other upstream 541941 18353363 ~ 18353446 (-) True LOC120575518
XR_005642008.1 other upstream 542660 18354082 ~ 18354165 (-) True LOC120575517
TU211888 other upstream 1297477 19108899 ~ 19120932 (-) True G156321

Expression Profile