RNA id: XM_039823950.1


Basic Information

Item Value
RNA id XM_039823950.1
length 3163
RNA type mRNA
GC content 0.42
exon number 6
gene id hmox2b
representative False

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 13757750 ~ 13764536 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCTTTTTGTTTGACTGTGTTCCTGAAGTTCAAGCCTGGACTCAAAGTAATTAAGCTCTAAGGCTTTAAGCTGCTGAATAAACTGGCAGAAGACCTCTTTCCTTTGATCCTCATCTCAGCGACAACAACAGCTACAGAGAAAAGGGTGAACTAACTGGCAGACAGCAACACACCACTAAAGTCGGCAGAGAAGATGGAGGCAACAGCCAATGTGTCCAATGGAGCAGGGCTGGTATATGAGGAAAAAGAAGACACTCTCGGTCCCGAGGATCTGTCTGAGGTGCTGGCAGCAGGGACCAAGGAGGTTCATGAAAAGGCTGAGAACACCCAGTTTGTGAAAGATTTCCTCAGGGGACGCATCCGCAAAGAGCTCTTCAAGCTTGGTGCCGTGGCACTCTACTATACTTATACAGCCATGGAGGAGGAGATTGAAAGGAACAAAGACCACCCCCACTTTGCCCCTCTATATTTTCCTTCAGAGCTGCACCGCCACGAGGCCCTGGCCCGTGACCTCGAGTACTTTTACGGCCCTGACTGGCAGAGCCAGGTCAGCTGCTCCCAGGCCACCCAGCGCTATGTAGACCGTATTCATCAAGTAGGGCAGGAGGACCCAGTGCTGCTGGTGGCCCACGCCTACACCCGCTACATGGGGGACCTGTCCGGGGGCCAGGTGCTAAAGAAGGTGGCACAGAGAGCCATGAAGCTGCCGCCCACTGGAGAGGGCTTGGAATTCTATCAGTTTGACGGCATCCATAGTGCCAAAGCATTCAAGCAGCTGTACCGTAGTCGGATGAACGACTTGGAACTGGACATGGAAACAAAGAAGAGGCTGGTAGAAGAGGCTGTCAAGGCCTTTCACTTCAACATGGAGGTGTTTGAGGAGTTGGACGAGATCGGTAAAACCATCCCGGAGGATGCTTTAAATGCTGGCATGCCCGTCCATGGGGCAATGGGTGGAGACATCAGCAAGTGTCCCTACTATGCTGCCAAAATGGCGGCGTCAGGTGGAACAGCATACGCCTGTCAGCTTGCCATGGCCGTACTCCGACACCCAACAGGACAGGTCCTGTTTGCTGCTTGGTTTGCTGCTCTGGCTGGATTGGCTGCATGGTATCTGATGTGATCCAGCTgtaagggagagggaggagaaccGTAGAAGGAAGGACAGTAAGGAGACAAGAAAACTCCCTCAAGCTGTACACCACATTTGATAGTTCCATGCAGACATTCTGAACAGGTCCAAGTTTATTTAGTGTTACATGTTTGCTGCTAATAATATTAGCTGACAGGAAATTAACTTGGACGTTATCAACAGAATTCCAATAAAATGATCTGTAGAAACGTtcgatccatccatccatccatccatccatcaagcTACACCTTGTTACAATTCATCCTCCCGGCTTTTTATTTCTCTACCTCCTCTGCACTATCCCTCCATCCTGGGTCCTTCCTACGCGTTTGGTCGTATCACAAGACCTAAAGCTGTTTTCTGATTTCGTCATGGAAGCACACAGTGTTAATAGCTAATTTGTTGTGACATTACATTTTAGcccaatttgaaatgaaactGCAAGATTGATAAAGCATAGTGACTTTTATAGATACTGCCTATGTGTAATTGGCTATACAGTAATAAATCCGTTACTAATGATGAATGCATTATCAAAATGAATTCATGGTAACCAtagtaaaaacatgttaaaacctACTATGCATATGTTATGCAGTATGTATACTGTTGAATGCTGTGTTGCTTTTGAACGAAATCTTTGCGTATTTGCAGAGATAATGTGCAGTTATGTGCTTCTTTAAATCCATTTTCACATTTCATGATTCAAACATGGGCTCAGATGTTTCCAAAAAAGTTTGTTCAGGTGTACTGTGAGACAGAGGATAGCAATTTTTCAAAATTTAGCACACCTACACTTTGACAAGTGTATGATTTATAAGCATCTTTCAGATATTAGTGAATATACTGGATATTTGATTCTCCACTGATGCATGTTCAAATGTACTATTTCTCTGTTGCCgaatgatatgatatgatatggcATCTTGtatttctaaaaacaaaaacaaaaaaaacctgccTGTTTAAATGCATAGCTTAACCATCCAAAATGAAGGATCAATTTTACCTGCTACATGAGCCTATATTAGGACAAAGCTGTTAACAGAGGTGATTGCAGCTGTTTTATAAGAAAGTAGTCCTTTGTAATGGTAATAGTTTGTCTTCATGAAGGCTATATGTGTCTGAATGTTGTGGTTTACTATGAACTACTTCAGGTTAGGTACTTCTAGGTATGGCCTTCAGCAGCTCAGCTCGTATGGATTTACCAGTATGCATCATCACTAAGACTGTAATCATTAGTCATATTTagtttatactgtatgttgggAACAACTTTCCCAGTAGGGCACAACTTTCAACATAAATAAGGAGGACTATATCGtgctgtgtgtactgtatgggGTGTAATTGCACTGTTTTGCGATTGAAGTTTAATTTTTATTCTGACACAGTAATGACATTTTATCAACTTTGCTTTATCTTTccaagcatttatttatttatttttgcttggATTTGTTTAACACACAGTACCTAAGGTAACCTACTGAAAATATTTCAACCAGGTTCATGTGCTGTGTGTATTTGCACAACTCATTCATAGATAAACCGATGCACAGTATTTTCATTAACAAAACTTTGTTCAGACATGGAAACATAAGTGATGATGCATTTTGTATTTGAGAGTCTCAGGTTCATTCTGCAGTTTGATGGCAATACAATGCATTGCATATGGAGGACTAAAACAGGGACTGCCCTAATATACTATAGTTCAATCAATGTCcatattttatgtttatgttccTACTTGAATTTCAGGAGTACAGGTAGTTTTGGTCATTGATTAAACCTTAGATTAAAAAGAGTGGGATGCTTGACTAATTCATGTTGATTTTGAATTCTGTTGTGTTTCCATTAACTATGCAGTTAATTCCTTTGTGTACATCTAAACTGGACAAAGCTTTATAGTGTTTGGCTTGAATACTCTTATTGTATGAGAGTGAAACCGCAGGAGAATGCTGTGCTGTGTATATTAGAATGCATTTTGTTTTCCTGCTAAGGCTGAAATAAAGGTGATTGATTTGGA

Function

GO:

id name namespace
GO:0006788 heme oxidation biological_process
GO:0004392 heme oxygenase (decyclizing) activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU209669 lncRNA downstream 65279 13656018 ~ 13692471 (-) True G154713
TU209628 lncRNA downstream 125914 13589524 ~ 13631836 (-) False tfap4
TU209511 lncRNA downstream 502977 13254473 ~ 13254773 (-) True G154601
TU209510 lncRNA downstream 504544 13252924 ~ 13253206 (-) True G154600
TU209356 lncRNA downstream 804362 12947199 ~ 12953388 (-) True G154515
TU209688 lncRNA upstream 11717 13774102 ~ 13775989 (-) True G154723
TU209681 lncRNA upstream 21455 13783840 ~ 13827791 (-) False G154717
TU209677 lncRNA upstream 62577 13824962 ~ 13827791 (-) True G154717
XR_005641993.1 lncRNA upstream 174383 13936768 ~ 13946397 (-) True LOC120575453
TU209765 lncRNA upstream 294082 14056467 ~ 14057312 (-) False med9
XM_039825272.1 mRNA downstream 9148 13636809 ~ 13748602 (-) True coro7
XM_039825280.1 mRNA downstream 121588 13632142 ~ 13636162 (-) True pam16
XM_039825279.1 mRNA downstream 157696 13589483 ~ 13600054 (-) True tfap4
XM_039826325.1 mRNA downstream 170996 13572655 ~ 13586754 (-) False srl
XM_039826242.1 mRNA upstream 97765 13860150 ~ 13863534 (-) False LOC120575446
XM_039826241.1 mRNA upstream 97765 13860150 ~ 13863533 (-) True LOC120575446
XM_039826248.1 mRNA upstream 121952 13884337 ~ 13950756 (-) True LOC120575451
XM_039823816.1 mRNA upstream 294029 14056414 ~ 14057354 (-) True med9
XM_039824745.1 mRNA upstream 337070 14099455 ~ 14106823 (-) True LOC120574465
XR_005641817.1 other downstream 335799 13335449 ~ 13421951 (-) False prkar1b
TU209391 other downstream 778065 12973332 ~ 12979685 (-) False sun1
XR_005641885.1 other downstream 784940 12956522 ~ 12972810 (-) False iqck
unassigned_transcript_848 other downstream 914776 12842893 ~ 12842974 (-) True trnal-uag_2
XR_005641884.1 other downstream 1192279 12427504 ~ 12565471 (-) False cep112
TU209766 other upstream 288353 14050738 ~ 14057312 (-) False med9
XR_005641939.1 other upstream 772586 14534971 ~ 14543992 (-) False LOC120574989
TU210021 other upstream 1027671 14790056 ~ 14790778 (-) False LOC120574213
TU210042 other upstream 1033641 14796026 ~ 14828220 (-) False LOC120574214
TU210040 other upstream 1089554 14851939 ~ 14857557 (-) False LOC120575102

Expression Profile