RNA id: XM_039825025.1


Basic Information

Item Value
RNA id XM_039825025.1
length 1026
RNA type mRNA
GC content 0.53
exon number 1
gene id rasd4
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8114974 ~ 8115999 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGCACACTCCCATGCATCTGCTATCATCATCCCCTTCAACACAACTACATCCAGCTCCATCACTGACATCAAAACAGTTTTCAGGATCCACAGGCAAAGGGAGCAGAGATTCTTTCAAGCAGTGTtttagagaagaagaaaaaaagagcaacaGAAACTCATCATGTCTTTTGAAGTGAAGGAGAAGACGGAGGTGCGTCTGGTGTTTttgggagcagcaggagtggGGAAGACAGCCCTCATCCAACGCTTCCTCAAAGACACTTTTGAGCCCAAGCACCGGCGGACAGTGGAGGAGCTCCACAGGAAAGAGTACGAGGTGGCGGGTGTCAAGGTCACCATCAGCATCATGGACACCAGCGGCAGCTACTCCTTTCCTGCCATGCGGAAGCTCTCCATCCAGAGCAGCGACGCCTTTGCCCTGGTCTACGCCGTGGATGACCCAGGATCCCTGGAGGCAGTCAAGAGTCTGCGAGAGGAGATCCTGGAAGTCAAAGAGGACAGGTACACGCCTATCGTGGTGATAGGCAACAAGATAGACCGTCGAGACGAGCGCCAGGTGTCCAGCAAGGACGTGCTGTCCATGATGGAGCTGGACTGGAACCACAGCTTCGTGGAGTCCTCTGCCAAAGACAACATCAACGTGCTGGAGGCTTTCAGAGAGCTGCTCCAGCAGGCCAACCTGCCCAGTCGGCTGAGTCCAGCGCTGTGCCGGAGACGGGAAACCTTCCCCAAGGAGAGCAAAAAGCGACCTCCTCTGAACAAGACCAAGAGCTGCCTCGTCTCATAATGACGTGGAGCTGCTCGGAGGGCAACGACGTCTAAGGAGATCGAGAGAAAACTGCCCAAAAAGAGACCGAAAGGGCTTTGTTGGTGGGGACGGACAGGCTGGAAAGCATGGCATCTAACCCCGTGACAGCAATGGAGGCACAGAGATGCAAGAATGAGGATGGACCATGTAACCATGAAAACAGATAccaccttaaagtgctcatattatgcttttttgcttttcccctttcctgt

Function

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207058 lncRNA downstream 22705 8087926 ~ 8092269 (-) False G152863
TU207059 lncRNA downstream 22705 8087926 ~ 8092269 (-) False G152863
TU207063 lncRNA downstream 22705 8087926 ~ 8092269 (-) False G152863
TU207064 lncRNA downstream 22705 8087926 ~ 8092269 (-) True G152863
XR_005641917.1 lncRNA downstream 48694 8063001 ~ 8066280 (-) True LOC120574882
TU207139 lncRNA upstream 175901 8291900 ~ 8292215 (-) True G152924
TU207140 lncRNA upstream 177039 8293038 ~ 8293257 (-) True G152925
TU207389 lncRNA upstream 334023 8450022 ~ 8454668 (-) True G153106
TU207394 lncRNA upstream 347180 8463179 ~ 8558912 (-) True G153111
TU207395 lncRNA upstream 352305 8468304 ~ 8470293 (-) True G153112
XM_039825384.1 mRNA downstream 14576 8093052 ~ 8100398 (-) True LOC120574885
XM_039825380.1 mRNA downstream 29031 8073505 ~ 8085943 (-) False LOC120574884
XM_039823725.1 mRNA upstream 21585 8137584 ~ 8141831 (-) False LOC120573855
XM_039823723.1 mRNA upstream 21585 8137584 ~ 8141827 (-) True LOC120573855
XM_039823722.1 mRNA upstream 21588 8137587 ~ 8141833 (-) False LOC120573855
XM_039826258.1 mRNA upstream 181739 8297738 ~ 8302271 (-) True nptx1l
XM_039826280.1 mRNA upstream 358481 8474480 ~ 8484692 (-) True cdr2l
XR_005641918.1 other downstream 14576 8082138 ~ 8100398 (-) False LOC120574885
TU206683 other downstream 1394331 6719784 ~ 6720643 (-) True G152567
TU206522 other downstream 1886860 6182408 ~ 6228114 (-) True G152441
TU206279 other downstream 2501306 5574680 ~ 5613668 (-) False atp5mf
TU207167 other upstream 325180 8441179 ~ 8444381 (-) True G152952
TU207482 other upstream 615398 8731397 ~ 8733019 (-) True G153172
TU207525 other upstream 696343 8812342 ~ 8816276 (-) False natd1
TU207545 other upstream 737761 8853760 ~ 8856957 (-) True tufm
TU207546 other upstream 737761 8853760 ~ 8857571 (-) False tufm

Expression Profile