RNA id: XM_039825072.1


Basic Information

Item Value
RNA id XM_039825072.1
length 1629
RNA type mRNA
GC content 0.57
exon number 2
gene id gpr139
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12902581 ~ 12917339 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTTTGCTCTCTTGCGTGCCCTTGCTCTCCATCTACCTTCCTCCCACCTTCcttcttcccctccctctctcctcctcctcctcttccctcctcctcctcctactgcGCTCTCGACTCGCTCTCATTCCCCCTCGCTCACACACTCAGGCAACATCCTCCCATCTCCACTTATTTCCCTCTCACCTCTCCGCTCCTCTTGCCTCCTTCCTCTCCGTCACCTACTGACACATATCATCTCTGGCATCTCCCCGTCTgttgtctccctctccctccattctctcctccatttctccctccttccctatACTCCCTCACACACTCAACCTTGCTGCCTCGCGCAAACTCACGCGTGCACACACTCTTGCTGATTGGCACTCAAGGACAGAGCACCCTCTCTCCCATACCAGTGACCAGGCGGTTTGCTCGTGTGGCCAGGCTTCTTGACACTGAGCTCAGCTGAGGAAGAGGACGAGGAAGAGGCCATGGAGCACAGCCACATCTTCCCTGTATTTCCCCCAAATGGGAGCACCTGGAAACCAGGGGAGCATCCCTCTGAGTTTGCCCAGGGATGCCCTCTCGGACCACTGCCTGTCATCTACTACAGTGTCCTGCTCTGTCTCGGCCTGCCGGCTAACATCCTGACCGTGGTTATCCTGTCCCAGCTGGTGCTGCGTCGCCAGAAGTCTTCCTACAACTATCTCCTGGCTCTGGCAGCCGCTGACATCCTGGTCCTGCTCCTCATTGTTTTTGTCGACTTCATATTGGAGGATTTCATTTTGGCCGCACCGCTGCCTCCGTCATTAAACAATGCGGTGCAGGTTCTGGAGTTCTCCTCCATCCACACCTCCATCTGGATCACCGTGCCTCTCACCATTGACCGTTACATCGCTGTTTGCCACCCGCTGCGCTACCATACAGTCTCCTACCCGGCCCGCACACGAAGGGTGATATTTGCTGTGTATATTGGGTGCTTGCTCTCTGCAGCTCCTTATTACTGGTGGCCTGAGCTGTGGCACAGCCTGCCTGGGgtgggtggtggtggaggaATAGTGGAGGGCAACAGGAGAACCGTGGCCCAGCATGTCCTGGTGTGGGCCCACTGCGCCACTGTCTACCTCCTCCCCTGCACTGTCTTCTTCTCCCTAAACGCTGGCATCGTTTGTAAGCTACGCCGACGACGCAGCTGTTTCCGTCTGCGGGGCTACTCTACCGGCAAGACCACCGCCATTCTCCTTGCCATCACCTCCATTTTCGCTGTTTTGTGGGCGCCACGTACCCTCATGATCCTCTATCACTTCTACTCCCCTCCACCAGCCTCACAAGGTGCTGGTCGACTGCTCCACATGCTCACCGATCTGGCAAACATGCTAGCGTTGCTCAACACCGGGGTCAACTTCTTCCTCTACTGCTTCATCAGCAAGCGTTTCCGAGGCATGGCGGCCAACGTGCTGCGAGCCTTGGTCCACTGCCGGAAGCAGCCGCCGCCATTCTACGCCAGCCACAACTTTTCCATCACAAGCAGCCCCTGGATCTCACCTGCCAACTCCCACTGCATCAAGATGTTGGTGTACCAGTATGACAAAAATGGGAAGCCCATCTGTATTTCCTCTTGAGTCCTCAGCTACCAGCA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K08428 GPR139; G protein-coupled receptor 139

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU209269 lncRNA downstream 121136 12779015 ~ 12781445 (-) True G154446
TU209257 lncRNA downstream 132459 12769409 ~ 12770122 (-) True G154438
TU209256 lncRNA downstream 133978 12766698 ~ 12768603 (-) True G154437
TU209226 lncRNA downstream 165118 12735503 ~ 12737463 (-) False LOC120575506
XR_005641892.1 lncRNA downstream 223491 12677555 ~ 12679090 (-) False LOC120574720
XR_005641887.1 lncRNA upstream 14394 12931733 ~ 12938664 (-) True LOC120574707
TU209356 lncRNA upstream 29860 12947199 ~ 12953388 (-) True G154515
TU209510 lncRNA upstream 335585 13252924 ~ 13253206 (-) True G154600
TU209511 lncRNA upstream 337134 13254473 ~ 13254773 (-) True G154601
TU209628 lncRNA upstream 672185 13589524 ~ 13631836 (-) False tfap4
XM_039825367.1 mRNA downstream 24367 12874376 ~ 12878214 (-) False LOC120574878
XM_039825366.1 mRNA downstream 24367 12874376 ~ 12878214 (-) True LOC120574878
XM_039825368.1 mRNA downstream 24367 12874380 ~ 12878214 (-) False LOC120574878
XM_039825364.1 mRNA downstream 38996 12861352 ~ 12863585 (-) False si:ch211-139g16.8
XM_039825363.1 mRNA downstream 38996 12861352 ~ 12863585 (-) True si:ch211-139g16.8
XM_039825073.1 mRNA upstream 37635 12954974 ~ 12972829 (-) True iqck
XM_039825075.1 mRNA upstream 37635 12954974 ~ 12972821 (-) False iqck
XM_039825076.1 mRNA upstream 37635 12954974 ~ 12972817 (-) False iqck
XM_039825077.1 mRNA upstream 37635 12954974 ~ 12972809 (-) False iqck
XM_039825074.1 mRNA upstream 37635 12954974 ~ 12972782 (-) False iqck
unassigned_transcript_848 other downstream 59607 12842893 ~ 12842974 (-) True trnal-uag_2
XR_005641884.1 other downstream 337110 12427504 ~ 12565471 (-) False cep112
unassigned_transcript_847 other downstream 1415656 11486854 ~ 11486925 (-) True trnaq-cug_14
TU208722 other downstream 1677035 11203450 ~ 11225546 (-) True G154033
TU208632 other downstream 1765099 11110968 ~ 11137482 (-) False tnrc6c1
XR_005641885.1 other upstream 39183 12956522 ~ 12972810 (-) False iqck
TU209391 other upstream 55993 12973332 ~ 12979685 (-) False sun1
XR_005641817.1 other upstream 418110 13335449 ~ 13421951 (-) False prkar1b
TU209766 other upstream 1133399 14050738 ~ 14057312 (-) False med9
XR_005641939.1 other upstream 1617632 14534971 ~ 14543992 (-) False LOC120574989

Expression Profile