RNA id: unassigned_transcript_755


Basic Information

Item Value
RNA id unassigned_transcript_755
length 476
RNA type V_gene_segment
GC content 0.49
exon number 2
gene id LOC120574361
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9319287 ~ 9319893 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTGTGTGGAGCATCAGATGTCACATCTCCAGCCTCAGGAtgatgaacacactcactcttcTGCTGgttgctctctctctgccctGTTGTACAAGTCAGAGTATGGAGTCCATTCCCTCCAGTTCAGTAGTGAAAAACCCTGGGGAGACTCTCAGTCTCTCCTGCAGGGGATCTGGCTTCACCTTTAGCTGCTGTGTtatgagctggatcagacaaCCTGCAGGAGAAGGACTGGAATGGATAGGGAACGGATACTCCTCTGCAAGTAGTAACACTTATGCCAGCAGTGTGCAGGGCCGTGTAGAAATCAGTAGAGATGACAGCAACAGCATGGTGTATCTGAGACTGTCCAACTTAAAGCCAGAGgactctgctgtgtattactgtgccagAGAAACACACTGGTTAAAGGAAGCAGAGAGGCTTGACAAAAACCTCAGACAAATTATTTTCCCAAGAACCTACAGGTGGCAGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207951 lncRNA downstream 15940 9248397 ~ 9303347 (-) True G153508
TU207940 lncRNA downstream 46173 9249829 ~ 9273114 (-) False LOC120574652
TU207952 lncRNA downstream 53920 9258210 ~ 9265367 (-) True G153509
TU207900 lncRNA downstream 94967 9217069 ~ 9224320 (-) False LOC120574662
TU207902 lncRNA downstream 99384 9219599 ~ 9219903 (-) True G153462
TU207976 lncRNA upstream 39635 9359528 ~ 9359850 (-) True G153527
TU207998 lncRNA upstream 222225 9542118 ~ 9548305 (-) True G153539
TU207921 lncRNA upstream 282964 9602857 ~ 9603106 (-) True G153481
TU208072 lncRNA upstream 432366 9752259 ~ 9798267 (-) True G153588
TU208076 lncRNA upstream 459396 9779289 ~ 9782563 (-) True G153591
XM_039825003.1 mRNA downstream 271164 9043413 ~ 9048123 (-) True cabp5b
XM_039825617.1 mRNA downstream 282459 9020086 ~ 9036828 (-) False sez6l2
XM_039825615.1 mRNA downstream 282702 9020086 ~ 9036585 (-) True sez6l2
XM_039825761.1 mRNA downstream 300547 9011223 ~ 9018740 (-) True kctd13
XM_039825590.1 mRNA downstream 308356 9003265 ~ 9010931 (-) True hirip3
XM_039824654.1 mRNA upstream 23808 9343701 ~ 9345172 (-) True LOC120574364
XM_039824655.1 mRNA upstream 71672 9391565 ~ 9406804 (-) True LOC120574368
XM_039825001.1 mRNA upstream 377750 9697643 ~ 9739305 (-) True LOC120574579
XM_039824129.1 mRNA upstream 741393 10061286 ~ 10149481 (-) False cacna1aa
XM_039824126.1 mRNA upstream 741393 10061286 ~ 10149481 (-) False cacna1aa
unassigned_transcript_754 other downstream 10908 9306764 ~ 9308379 (-) True LOC120574360
unassigned_transcript_753 other downstream 13701 9305037 ~ 9305586 (-) True LOC120574634
TU207966 other downstream 24983 9293877 ~ 9294304 (-) True G153519
TU207926 other downstream 40362 9278377 ~ 9278925 (-) True G153486
TU207957 other downstream 42285 9276480 ~ 9277002 (-) False LOC120574591
unassigned_transcript_756 other upstream 6570 9326463 ~ 9336353 (-) True LOC120574362
TU207918 other upstream 13287 9333180 ~ 9333744 (-) True G153478
unassigned_transcript_757 other upstream 19378 9339271 ~ 9339721 (-) True LOC120574363
unassigned_transcript_758 other upstream 21017 9340910 ~ 9341346 (-) True LOC120574640
TU207965 other upstream 24823 9344716 ~ 9345215 (-) False LOC120574364

Expression Profile