RNA id: TU219544


Basic Information

Item Value
RNA id TU219544
length 672
RNA type TUCP
GC content 0.60
exon number 6
gene id LOC120544212
representative False

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 101803 ~ 156815 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTACCTGCAGTCAGtaccacacactacacactacacactacacactacactacacaccacACCACTGGTCCCGCTGCAGCTGGACCGAGCTGCACAAGTACCTGCATAAATACGACTGTCTCCGTGACGACCCGTTCCAACACGATTGGCCGGCTCAGCCTCCGTTGCCGGGGTTTCACTACTCCATGGACCAACAGTGTCGCTTCGACTTCGGACCAGGATACAGCCTCTGTACTGCaTACGCGAGCATCGAGCCCTGCAGGCAGCTGTGGTGCAGCGAGTACAGCAACCCGTTCTACTGTAAGACCAAGAAAGGCCCGCCGCTGGACGGGACCAAGTGTGGACCGGGGAAGCACTGCTTTAAAGGTCTCTGCATGAAGCTGACCCCCAACCTGCTGAGACAGGACGGCGGCTGGGGGGCGTGGAGCGCGTGGGGCGCCTGCTCCCGGACCTGCGGGGGCGGAGTCCAGTTCCGGTCCCGGCGCTGCGACAGCCCAGCTCCAGCCAACGGGGGGCGCACCTGCTTCGGAAACAGCTACGAGTTCACGCTGTGCAGCCGGGACGAGTGTCCCCCGCTCACTGACTTCAGAGAGGATCAGTGTAAAGTCTGGAATCCATTTTTCGAACATGAAGGAAAAAAACATCACTGGCTGCCGTACCAACACCCTGACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU219529 lncRNA downstream 19174 104283 ~ 105174 (-) True G162175
TU219522 lncRNA downstream 41519 81511 ~ 82829 (-) True G162169
TU219521 lncRNA downstream 86823 36462 ~ 37525 (-) True G162168
TU219554 lncRNA upstream 7300 144687 ~ 193614 (-) False G162187
TU219564 lncRNA upstream 14072 151459 ~ 156815 (-) False LOC120544212
TU219585 lncRNA upstream 82749 220136 ~ 220441 (-) True G162206
TU219597 lncRNA upstream 111285 248672 ~ 249157 (-) True G162218
TU219601 lncRNA upstream 112825 250212 ~ 252990 (-) True G162221
XM_039778022.1 mRNA downstream 23641 94635 ~ 100707 (-) True ndufa2
XM_039777741.1 mRNA upstream 48025 185412 ~ 194355 (-) True LOC120544147
XM_039777740.1 mRNA upstream 48025 185412 ~ 194349 (-) False LOC120544147
XM_039777765.1 mRNA upstream 175005 312392 ~ 319615 (-) False LOC120544162
XM_039777762.1 mRNA upstream 175005 312392 ~ 319615 (-) True LOC120544162
XM_039777764.1 mRNA upstream 175005 312392 ~ 319608 (-) False LOC120544162
TU219526 other downstream 23656 94636 ~ 100692 (-) False ndufa2
TU219519 other downstream 100911 21716 ~ 23437 (-) True G162166
TU219661 other upstream 333705 471092 ~ 473969 (-) False pwwp2a
TU219576 other upstream 410232 547619 ~ 558892 (-) False LOC120544218
TU219693 other upstream 432865 570252 ~ 572002 (-) False ttc1
TU219748 other upstream 649384 786771 ~ 794731 (-) True G162311
TU219808 other upstream 979686 1117073 ~ 1118688 (-) True G162352

Expression Profile