RNA id: TU219564


Basic Information

Item Value
RNA id TU219564
length 383
lncRNA type sense_over
GC content 0.51
exon number 2
gene id LOC120544212
representative False

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 101803 ~ 156815 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACTCAGCAGCTCTCCGTCCAGcagtctgtctctcagtctgtctctcagtccagcagtctgtctctcagtctgtctctcagtcCAGCAGTCTGTCTCTCAATCTGTCTCTCCGTCCAGCAGtctgtctctccgtctgtctctccgtctgtctctccGTCCAGcagtctgtctctcagtctgtctctcagtctgtccctcagtctgtctctccgtctgtctctccgtctctgtctgtctctctcagaaTGGACCAGGTTCATTATGGATTATTGATTCTTGTGTTTCTGCTGCAGATGGACTGTTTACCCTCCGTTTACATCACTGACAACTCAGATTCTCTCCATCAGGTTCTGTCAGAGTTCGCTGTCGTTCGTCCAATCAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU219553 lncRNA downstream 6133 116055 ~ 145326 (-) True G162187
TU219560 lncRNA downstream 17888 131919 ~ 133571 (-) False G162190
TU219562 lncRNA downstream 17888 131919 ~ 133571 (-) True G162190
TU219561 lncRNA downstream 18392 131919 ~ 133067 (-) False G162190
TU219529 lncRNA downstream 46285 104283 ~ 105174 (-) True G162175
TU219585 lncRNA upstream 63321 220136 ~ 220441 (-) True G162206
TU219597 lncRNA upstream 91857 248672 ~ 249157 (-) True G162218
TU219601 lncRNA upstream 93397 250212 ~ 252990 (-) True G162221
TU219548 lncRNA upstream 105818 262633 ~ 264470 (-) True G162185
TU219551 lncRNA upstream 163431 320246 ~ 320818 (-) True G162186
XM_039778022.1 mRNA downstream 50752 94635 ~ 100707 (-) True ndufa2
XM_039777741.1 mRNA upstream 28597 185412 ~ 194355 (-) True LOC120544147
XM_039777740.1 mRNA upstream 28597 185412 ~ 194349 (-) False LOC120544147
XM_039777765.1 mRNA upstream 155577 312392 ~ 319615 (-) False LOC120544162
XM_039777762.1 mRNA upstream 155577 312392 ~ 319615 (-) True LOC120544162
XM_039777764.1 mRNA upstream 155577 312392 ~ 319608 (-) False LOC120544162
TU219544 other downstream 14072 124348 ~ 137387 (-) False LOC120544212
TU219526 other downstream 50767 94636 ~ 100692 (-) False ndufa2
TU219519 other downstream 128022 21716 ~ 23437 (-) True G162166
TU219661 other upstream 314277 471092 ~ 473969 (-) False pwwp2a
TU219576 other upstream 390804 547619 ~ 558892 (-) False LOC120544218
TU219693 other upstream 413437 570252 ~ 572002 (-) False ttc1
TU219748 other upstream 629956 786771 ~ 794731 (-) True G162311
TU219808 other upstream 960258 1117073 ~ 1118688 (-) True G162352

Expression Profile