RNA id: TU219744



Basic Information


Item Value
RNA id TU219744
length 336
lncRNA type inter_gene
GC content 0.60
exon number 2
gene id G162311
representative False

Chromosome Information


Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 786771 ~ 794731 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ggtaggtgtgtgtgtgtcctctcacCGATGCGTCCGATCTTCATCCCAGACCGAGCCAGAGCTCTGAGAGCAGACTGAGCTCCTGGACCGGGAGTCTTGGTCCTGtcCCCCCGGTGGCCCTCAGCTTGATGTGCAGCGCCGTGATGCCGAGCTCTTTGCAGCGCTGAGCCACGTCCTGAGCGGCCAACATGGCGGCGTACGGTGACGACTCGTCTCTGTCGGCCTTCACCTTCATGCCGCCGGTCACACGGCAGATCGTCTCCCTGGAAACACACCGGCCAATCAGAACACAGGTACAACAACACCGCCTGCCCAGGATACTGAAAAATAAGTTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU219738 lncRNA downstream 15483 771494 ~ 776493 (-) True G162307
TU219737 lncRNA downstream 15483 773404 ~ 776493 (-) False G162307
TU219736 lncRNA downstream 26594 764763 ~ 765382 (-) True G162306
TU219723 lncRNA downstream 83909 707459 ~ 708067 (-) True G162295
TU219721 lncRNA downstream 108415 676665 ~ 683561 (-) True G162293
TU219703 lncRNA upstream 7242 800378 ~ 864392 (-) True G162281
TU219755 lncRNA upstream 27750 820886 ~ 821631 (-) True G162315
TU219756 lncRNA upstream 35959 829095 ~ 833983 (-) True LOC120544221
TU219758 lncRNA upstream 50385 843521 ~ 872987 (-) True G162318
TU219702 lncRNA upstream 68254 861390 ~ 889809 (-) True G162280
XM_039777771.1 mRNA downstream 8742 778568 ~ 783234 (-) True LOC120544167
XM_039777722.1 mRNA downstream 64971 694265 ~ 727005 (-) True LOC120544137
XM_039777844.1 mRNA downstream 128230 636654 ~ 663746 (-) True LOC120544220
XM_039777843.1 mRNA downstream 159037 591034 ~ 632939 (-) True tmprss15
XM_039777743.1 mRNA downstream 213127 570235 ~ 578849 (-) False ttc1
XM_039777755.1 mRNA upstream 13015 806151 ~ 815589 (-) True LOC120544156
XM_039777845.1 mRNA upstream 35959 829095 ~ 844858 (-) False LOC120544221
XM_039777848.1 mRNA upstream 66796 859932 ~ 890362 (-) True chm
XM_039777784.1 mRNA upstream 190258 983394 ~ 983728 (-) True LOC120544177
XM_039777772.1 mRNA upstream 330243 1123379 ~ 1126081 (-) True LOC120544169
TU219693 other downstream 219974 570252 ~ 572002 (-) False ttc1
TU219576 other downstream 233084 547619 ~ 558892 (-) False LOC120544218
TU219661 other downstream 318007 471092 ~ 473969 (-) False pwwp2a
TU219544 other downstream 654589 124348 ~ 137387 (-) False LOC120544212
TU219526 other downstream 691284 94636 ~ 100692 (-) False ndufa2
TU219808 other upstream 323937 1117073 ~ 1118688 (-) True G162352
TU219825 other upstream 399666 1192802 ~ 1310616 (-) True G162358
TU219834 other upstream 402977 1196113 ~ 1201434 (-) True G162359
TU219891 other upstream 565050 1358186 ~ 1358523 (-) True G162396
TU219894 other upstream 590851 1383987 ~ 1424401 (-) False G162398

Expression Profile