Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU220728 |
| length | 599 |
| lncRNA type | sense_over |
| GC content | 0.55 |
| exon number | 2 |
| gene id | LOC120544249 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053127.1 |
| NCBI id | CM020924.1 |
| chromosome length | 37730433 |
| location | 3178767 ~ 3233282 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU220711 | lncRNA | downstream | 93 | 3160965 ~ 3215972 (-) | True | G162950 |
| TU220710 | lncRNA | downstream | 93 | 3215355 ~ 3215972 (-) | False | G162950 |
| TU220724 | lncRNA | downstream | 3142 | 3209026 ~ 3212923 (-) | False | LOC120544249 |
| TU220731 | lncRNA | downstream | 29661 | 3185970 ~ 3186404 (-) | False | LOC120544311 |
| TU220719 | lncRNA | downstream | 50179 | 3163483 ~ 3165886 (-) | True | G162954 |
| TU220743 | lncRNA | upstream | 65788 | 3283343 ~ 3285678 (-) | True | G162967 |
| TU220741 | lncRNA | upstream | 65946 | 3283501 ~ 3285678 (-) | False | G162967 |
| TU220746 | lncRNA | upstream | 71504 | 3289059 ~ 3307952 (-) | True | G162970 |
| TU220758 | lncRNA | upstream | 118956 | 3336511 ~ 3339110 (-) | True | G162981 |
| TU220646 | lncRNA | upstream | 127120 | 3344675 ~ 3346908 (-) | True | G162913 |
| XM_039777956.1 | mRNA | downstream | 27045 | 3186153 ~ 3189020 (-) | True | LOC120544311 |
| XM_039776996.1 | mRNA | downstream | 129848 | 3070070 ~ 3086217 (-) | True | ncbp3 |
| XM_039777007.1 | mRNA | downstream | 171534 | 3037923 ~ 3044531 (-) | True | LOC120543772 |
| XM_039777000.1 | mRNA | downstream | 278313 | 2924482 ~ 2937752 (-) | False | LOC120543768 |
| XM_039826535.1 | mRNA | upstream | 130065 | 3347620 ~ 3354553 (-) | True | LOC120575705 |
| XM_039776834.1 | mRNA | upstream | 372756 | 3590311 ~ 3592122 (-) | True | LOC120543677 |
| XM_039776833.1 | mRNA | upstream | 380156 | 3597711 ~ 3599732 (-) | True | LOC120543676 |
| XM_039776843.1 | mRNA | upstream | 385889 | 3603444 ~ 3604114 (-) | True | LOC120543685 |
| XM_039776832.1 | mRNA | upstream | 408175 | 3625730 ~ 3639477 (-) | False | LOC120543675 |
| TU220733 | other | downstream | 17817 | 3190765 ~ 3198248 (-) | False | LOC120544311 |
| XR_005636393.1 | other | downstream | 120591 | 3038352 ~ 3095474 (-) | False | LOC120543772 |
| TU220637 | other | downstream | 386471 | 2827089 ~ 2829594 (-) | True | G162910 |
| XR_005636415.1 | other | downstream | 564662 | 2639282 ~ 2651403 (-) | False | LOC120543939 |
| unassigned_transcript_888 | other | downstream | 985970 | 2230024 ~ 2230095 (-) | True | trnae-cuc_26 |
| TU220739 | other | upstream | 10315 | 3227870 ~ 3232004 (-) | False | LOC120544249 |
| unassigned_transcript_891 | other | upstream | 187632 | 3405187 ~ 3405258 (-) | True | trnad-guc_8 |
| unassigned_transcript_892 | other | upstream | 188475 | 3406030 ~ 3406102 (-) | True | trnav-aac_3 |
| unassigned_transcript_893 | other | upstream | 192251 | 3409806 ~ 3409878 (-) | True | trnav-cac |
| unassigned_transcript_896 | other | upstream | 198811 | 3416366 ~ 3416438 (-) | True | trnav-cac_1 |
