Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005636383.1 |
| length | 224 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 3 |
| gene id | LOC120543687 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053127.1 |
| NCBI id | CM020924.1 |
| chromosome length | 37730433 |
| location | 3984293 ~ 3987038 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005636386.1 | lncRNA | downstream | 8486 | 3975407 ~ 3975807 (-) | True | LOC120543690 |
| XR_005636384.1 | lncRNA | downstream | 15200 | 3968385 ~ 3969093 (-) | True | LOC120543688 |
| TU221215 | lncRNA | downstream | 50813 | 3932672 ~ 3933480 (-) | True | G163261 |
| TU221221 | lncRNA | downstream | 90405 | 3893513 ~ 3893888 (-) | True | G163267 |
| TU220906 | lncRNA | downstream | 127745 | 3824470 ~ 3856548 (-) | True | G163090 |
| TU221239 | lncRNA | upstream | 337 | 3987375 ~ 3987691 (-) | True | G163285 |
| TU221266 | lncRNA | upstream | 147715 | 4134753 ~ 4135589 (-) | True | G163305 |
| TU221251 | lncRNA | upstream | 158761 | 4145799 ~ 4170217 (-) | False | G163297 |
| TU221254 | lncRNA | upstream | 158761 | 4145799 ~ 4201600 (-) | False | G163297 |
| TU221272 | lncRNA | upstream | 160825 | 4147863 ~ 4157624 (-) | True | rnasekb |
| XM_039776836.1 | mRNA | downstream | 98420 | 3868758 ~ 3885873 (-) | False | LOC120543678 |
| XM_039776835.1 | mRNA | downstream | 98420 | 3868758 ~ 3885873 (-) | True | LOC120543678 |
| XM_039776841.1 | mRNA | downstream | 117059 | 3861769 ~ 3867234 (-) | True | LOC120543683 |
| XM_039776840.1 | mRNA | downstream | 319517 | 3663829 ~ 3664776 (-) | True | LOC120543681 |
| XM_039776829.1 | mRNA | downstream | 344816 | 3625731 ~ 3639477 (-) | True | LOC120543675 |
| XM_039776847.1 | mRNA | upstream | 125831 | 4112869 ~ 4124813 (-) | True | LOC120543692 |
| XM_039776846.1 | mRNA | upstream | 140751 | 4127789 ~ 4137034 (-) | True | LOC120543691 |
| XM_039776849.1 | mRNA | upstream | 161474 | 4148512 ~ 4153475 (-) | False | rnasekb |
| XM_039778422.1 | mRNA | upstream | 211320 | 4198358 ~ 4207993 (-) | True | LOC120544557 |
| XM_039778414.1 | mRNA | upstream | 262088 | 4249126 ~ 4260159 (-) | True | LOC120544550 |
| TU221205 | other | downstream | 110178 | 3870325 ~ 3874115 (-) | True | G163259 |
| unassigned_transcript_913 | other | downstream | 443270 | 3540951 ~ 3541023 (-) | True | trnav-uac_20 |
| unassigned_transcript_911 | other | downstream | 445827 | 3538385 ~ 3538466 (-) | True | trnas-uga_24 |
| unassigned_transcript_910 | other | downstream | 512967 | 3471254 ~ 3471326 (-) | True | trnav-cac_6 |
| unassigned_transcript_909 | other | downstream | 513441 | 3470780 ~ 3470852 (-) | True | trnav-aac_8 |
| TU221271 | other | upstream | 162803 | 4149841 ~ 4153463 (-) | False | rnasekb |
| TU221326 | other | upstream | 294735 | 4281773 ~ 4286796 (-) | False | LOC120544555 |
| TU221342 | other | upstream | 315528 | 4302566 ~ 4304048 (-) | True | G163334 |
| TU221291 | other | upstream | 347805 | 4334843 ~ 4415431 (-) | False | G163315 |
| TU221286 | other | upstream | 379461 | 4366499 ~ 4401741 (-) | True | G163315 |
