Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00006883 |
| length | 901 |
| lncRNA type | retained_intron |
| GC content | 0.39 |
| exon number | 3 |
| gene id | XLOC_003513 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 28517562 ~ 28520764 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00006878 | lncRNA | upstream | 70568 | 28442373 ~ 28447433 (+) | False | XLOC_003511 |
| TCONS_00008625 | lncRNA | upstream | 70930 | 28446313 ~ 28447071 (+) | True | XLOC_003511 |
| TCONS_00006877 | lncRNA | upstream | 71139 | 28442373 ~ 28446862 (+) | False | XLOC_003511 |
| TCONS_00008624 | lncRNA | upstream | 93687 | 28418774 ~ 28424314 (+) | True | XLOC_003510 |
| TCONS_00006868 | lncRNA | upstream | 773719 | 27738489 ~ 27744282 (+) | True | XLOC_003507 |
| TCONS_00008626 | lncRNA | downstream | 13069 | 28533224 ~ 28537315 (+) | False | XLOC_003514 |
| TCONS_00008627 | lncRNA | downstream | 13069 | 28533224 ~ 28588634 (+) | False | XLOC_003514 |
| TCONS_00008628 | lncRNA | downstream | 13069 | 28533224 ~ 28594476 (+) | False | XLOC_003514 |
| TCONS_00008629 | lncRNA | downstream | 26879 | 28547034 ~ 28616959 (+) | True | XLOC_003514 |
| TCONS_00008630 | lncRNA | downstream | 117307 | 28637462 ~ 28643700 (+) | True | XLOC_003517 |
| TCONS_00006879 | mRNA | upstream | 3023 | 28476298 ~ 28514978 (+) | True | XLOC_003512 |
| TCONS_00006876 | mRNA | upstream | 93815 | 28218141 ~ 28424186 (+) | False | XLOC_003510 |
| TCONS_00006875 | mRNA | upstream | 96907 | 28166165 ~ 28421094 (+) | False | XLOC_003510 |
| TCONS_00006874 | mRNA | upstream | 99016 | 28166165 ~ 28418985 (+) | False | XLOC_003510 |
| TCONS_00006873 | mRNA | upstream | 395547 | 28109403 ~ 28122454 (+) | True | XLOC_003509 |
| TCONS_00006888 | mRNA | downstream | 97409 | 28617564 ~ 28619811 (+) | True | XLOC_003515 |
| TCONS_00006889 | mRNA | downstream | 100528 | 28620683 ~ 28631342 (+) | True | XLOC_003516 |
| TCONS_00006891 | mRNA | downstream | 1017601 | 29537756 ~ 29540033 (+) | True | XLOC_003522 |
| TCONS_00006894 | mRNA | downstream | 1151506 | 29671661 ~ 29677714 (+) | False | XLOC_003525 |
| TCONS_00006895 | mRNA | downstream | 1151514 | 29671669 ~ 29677693 (+) | True | XLOC_003525 |
| TCONS_00006865 | other | upstream | 997428 | 27520456 ~ 27520573 (+) | True | XLOC_003503 |
| TCONS_00006853 | other | upstream | 1903414 | 26604611 ~ 26614587 (+) | False | XLOC_003495 |
| TCONS_00006838 | other | upstream | 2439940 | 26077947 ~ 26078061 (+) | True | XLOC_003488 |
| TCONS_00006817 | other | upstream | 3035031 | 25481107 ~ 25482970 (+) | False | XLOC_003476 |
| TCONS_00006814 | other | upstream | 3039583 | 25477743 ~ 25478418 (+) | True | XLOC_003475 |
| TCONS_00006890 | other | downstream | 831946 | 29352101 ~ 29352221 (+) | True | XLOC_003521 |
| TCONS_00006893 | other | downstream | 1046592 | 29566747 ~ 29571528 (+) | True | XLOC_003523 |
| TCONS_00006949 | other | downstream | 2451879 | 30972034 ~ 30997832 (+) | False | XLOC_003549 |
| TCONS_00006950 | other | downstream | 2454616 | 30974771 ~ 30974892 (+) | True | XLOC_003550 |
| TCONS_00006952 | other | downstream | 2495364 | 31015519 ~ 31024572 (+) | True | XLOC_003549 |
