Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039777373.1 |
| length | 903 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 4 |
| gene id | LOC120543944 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053127.1 |
| NCBI id | CM020924.1 |
| chromosome length | 37730433 |
| location | 2476851 ~ 2487119 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0009072 | aromatic amino acid family metabolic process | biological_process |
| GO:0000255 | allantoin metabolic process | biological_process |
| GO:0044421 | obsolete extracellular region part | cellular_component |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU220583 | lncRNA | downstream | 31583 | 2428273 ~ 2445268 (-) | True | G162866 |
| TU220577 | lncRNA | downstream | 98235 | 2368495 ~ 2378616 (-) | True | G162860 |
| TU220570 | lncRNA | downstream | 129158 | 2283050 ~ 2347693 (-) | True | G162854 |
| TU220567 | lncRNA | downstream | 192504 | 2251581 ~ 2284347 (-) | False | G162854 |
| TU220542 | lncRNA | downstream | 217986 | 2257276 ~ 2258865 (-) | True | G162832 |
| TU220590 | lncRNA | upstream | 21878 | 2508997 ~ 2509289 (-) | True | G162873 |
| TU220591 | lncRNA | upstream | 28613 | 2515732 ~ 2516016 (-) | True | G162874 |
| TU220592 | lncRNA | upstream | 32721 | 2519840 ~ 2521948 (-) | True | G162875 |
| TU220595 | lncRNA | upstream | 83447 | 2570566 ~ 2570799 (-) | True | G162878 |
| TU220596 | lncRNA | upstream | 96350 | 2583469 ~ 2583703 (-) | True | G162879 |
| XM_039777875.1 | mRNA | downstream | 95636 | 2379567 ~ 2381215 (-) | True | LOC120544242 |
| XM_039777367.1 | mRNA | downstream | 115798 | 2342150 ~ 2361053 (-) | True | LOC120543939 |
| XM_039777366.1 | mRNA | downstream | 124696 | 2342150 ~ 2352155 (-) | False | LOC120543939 |
| XM_039777870.1 | mRNA | downstream | 232764 | 2235522 ~ 2244087 (-) | True | ncf1 |
| XM_039777369.1 | mRNA | downstream | 250395 | 2186780 ~ 2226456 (-) | True | st6gal1 |
| XM_039777232.1 | mRNA | upstream | 326942 | 2814061 ~ 2855055 (-) | False | pcf11 |
| XM_039777231.1 | mRNA | upstream | 326942 | 2814061 ~ 2855055 (-) | True | pcf11 |
| XM_039777881.1 | mRNA | upstream | 367907 | 2855026 ~ 2868330 (-) | True | LOC120544248 |
| XM_039777003.1 | mRNA | upstream | 386110 | 2873229 ~ 2898424 (-) | True | LOC120543771 |
| XM_039777002.1 | mRNA | upstream | 395236 | 2882355 ~ 2884569 (-) | True | LOC120543770 |
| unassigned_transcript_888 | other | downstream | 246756 | 2230024 ~ 2230095 (-) | True | trnae-cuc_26 |
| unassigned_transcript_887 | other | downstream | 269643 | 2207120 ~ 2207208 (-) | True | trnay-gua_44 |
| TU220454 | other | downstream | 640349 | 1835969 ~ 1836502 (-) | True | G162787 |
| TU219896 | other | downstream | 1036033 | 1437253 ~ 1440818 (-) | True | G162399 |
| TU219894 | other | downstream | 1052450 | 1383987 ~ 1424401 (-) | False | G162398 |
| XR_005636415.1 | other | upstream | 152163 | 2639282 ~ 2651403 (-) | False | LOC120543939 |
| TU220637 | other | upstream | 339970 | 2827089 ~ 2829594 (-) | True | G162910 |
| XR_005636393.1 | other | upstream | 551233 | 3038352 ~ 3095474 (-) | False | LOC120543772 |
| TU220727 | other | upstream | 691648 | 3178767 ~ 3217555 (-) | False | LOC120544249 |
| TU220733 | other | upstream | 703646 | 3190765 ~ 3198248 (-) | False | LOC120544311 |
