RNA id: XM_039777843.1


Basic Information

Item Value
RNA id XM_039777843.1
length 3134
RNA type mRNA
GC content 0.58
exon number 28
gene id tmprss15
representative True

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 591034 ~ 632939 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CAGCAGCCAGTTCTTCTCCAGCTGAGCCCAGATCAGACCCAGAGTCAGTTTGTGCAGAGACCCACGGAGCAGACAGAATGAAGCTCCGTCTCTCGTCTCTGGAGCTTCTCCTGGCCGTCGTGTCGACTCTTCTCCTTGCCTGCTGTATCGGACTCAGCGTAGTTTCATGGCTCAGCCTGAAGCCTGAAGGTGCCATTAAGCCAGGCGTGCTGAGCGGCCGCATGGTGATCACACACGGAGCAGTTTACTCCGACGAGCTGAAAAACTCCGGCAGTCCGCAGTTTAAATCTCTTGCCTTTGACGTCCAAAACCTGGTGTCGGAGGCGTTCGGTCTCAGCGAGCTCCGACTGGACTTCCAATCCTGCCGGATTTTACACTTCAGtcgGGGCAGCGTGGTCGTGATCTTTGACATCTGGTTCAGTCAGCTGATCGAGGTACAGGAGGCAGAGCATCAGCTATGGGCGGGGCTTCAGGAGGCCGGGAACACGGGACTGGTGATCGACAGAAACAGCATCCACATCACAGAGAAACCAGACGAGAcgacagctgctccaacaaccatCACACCGACAACCATCACTCCTACAACAGgGACATGTCCTCCTCTTCAGACATCATGTGCCGATGGATCTGTGTGTGTTCGGATCGATCAGCTGTGTGACGGTGTCCCCGACTGTCCCGACGCCTCGGACGAAGGCGCTGCTCGCTGTGCGACGGCGTGTGACAGACAGTTCGTGCTGAGCGGTCCGAGCGGTTTCTTCAGTACATCAGACATCTCGGAGACgtacaacagcagcagcttctgTCGCTGGATCCTCAGGGTGGAGAGAGGACTGTCTGTTCAGATCAACTTCCTCCGGTTTGAAACAGAAGAAAACATCGACACTCTGAAACTTTATGAAGGCGTCGGAGCAGACAAACTGctgacagatgaacagAAGCTGACCTGTACCTTTGAGCAGGGCATGTGTTTCTGGCGGCAGCAGTACGACGATGACGGTGACTGGATTCGAACCCGCGGCGCCACGTTTCCTCCGCTGAGCGGCCCGAGTGGCGACCACACGCTCAACGACAGCTCCGgTTTCTACATCGTGACTCCTCTGAGTCCCGGCCAATGGCTGAAGAGCTTCAGGATCTATAGCCTCCCTCTGACTCCGGCCACTCCGCCTGCCGCCTGCCTCAGCTTCTGGTACCACATGTTTGGGGAGGACGTCTACCGTCTCCGAGTGCTGCTGTCCCAGCCGGCCGTCACCGTGCTGTTCCAGAGAGACGGTAACTACGGCGACCGTTGGAACTACGGCCAGGTGACGCTGAACCTGACGACGGAGAGCACGGTGGTGTTTGAGGCGCTGAAGAAAGGAGGGATGAGGAACGACATCGCTCTGGATGACATCacgctgacctctgacccctgtGGCCCCGCCCCCCCTGAACCAACCAACGTCCCGCCTCCAACAACGCCCCCCCCGATCCCAGcTGACTGCGGAGGACCCTTCGATCTCTGGGAGCCAAACTCCACCTTCAGTTCCCCaaattacccacaatcctacgGGAACGAGGCCAAGTGCCTGTGGACGCTGCACGCCACCGAGGGGCGGAGCCTACAGCTCCACTTCCTGGACTTTGATGTTGAAGCAACCTATGACGTGGTGGAGGTCCGGGACGGGGCGGGGCCACACTCCACCTTACTGGCTGTTCTCACTGGCAGTGATGGCCCCGCCCACGAATTGTTCTCAACAACCAATCAGATGTCAGTGTGGTTGTTTACGGACGAGTCGGGTCACAGCCGAGGATTCAGAGCCAACTTCACCTCGGGGGTCGGCCTGGGGTCACCGGCTGCGTGTGCAGTCGGTCAGTTCCAGTGTCAGACAGGCAGTTGTATCCATGGTAACGGTCAGTGTGATGGCAACGCCGACTGTCCTGACGCCTCTGATGAAGCCGACTGCGtTGTGTTACCCAGCAACAGTTCCAGTGCTCTACAGTATAAACTAGTTTCCTCTCTGCTGACCGTGTGTTCTGACACCTGGACGTCTCAGCTGTCTGACTTCACCTGTCAGTACCTGGGATACAGGTCGGGGGAAATCACTCTGCTGCCGGCTCGGCCACAAGACTCACCGTTTACATCCTTCAACATCACCAACGGAGCGCTGCAAACCAGCCTCAGTGATTCATGCGCCAGTGAGGAAGTGATTTCTCTGAGCTGTGACAACCAACCTTGCGGGGTTAGAAACGTCACTAATGCACCGAGGGAGATGGACCAATCAGCAGAGAGGAAACCTGCTAAAGGTGACATCAGAGTGGTGGGCGGGACTAACGCTGAGAAGGGGGCGTGGCCGTGGATCGTGTCTCTGCAGTGGAGAGGACGTCAAGTGTGTGGAGCGTCTCTGATTGGCCGAGACTGGCTGCTGACCGCCGCACACTGCGTCTATGGGAAGAACGTGCACCTGCAGTGGTGGGAGGCGCTGCTCGGCCTCCACGCTCAGAGCAACAGCAGCGCCGCAGACGTCCAGACCCGACGAGTCGATCGCATCGTGATCCACCCGCAGTACAACAGGCAGACCAAACAGGCCGACATCGCCATGATGCatctgcagcagccaatcagcttcaCCGAGGTGGTCCAGCCGGTGTGTTTACCGGCCGATGGTCAGGGCTTCACAGCTGGAACCAGATGTTGGATCGCTGGGTGGGGACGCACTGAAGAGCAGGgttcCCTGCCTGACGTGCTGCAGGAGGCGGAGCTTCCTCTGCTGTCCCAGTCTGAGTGTGAGGACCAGTTACCGGAGTACTCCATCACCTCCAGCATGGTCTGTGCCGGCCTCCCCGAGGGGGGGGTCGATGCCTGTCAGGGCGACTCTGGAGGTCCACTGGTGTGTCTGGACGATGGATACTggactctgattggtcaTACCCACCAGACCCCCCAGACCACCCAGACCCACCACACTACCCCACAGTACCCACCAGACCCCCCAGACCTCCCAGACCTCCCAGACCCACCACAGTACCCACCAGACCCCCCAGACCTCCCAGACCAGACGCAGTACCCCCTAAATACACATGGATCTCCCAGACCAGACACAGTACCCCCTAAATACACATGGATCTCCCAGACCAGACGCAGTACCACCTAA

Function

GO:

id name namespace
GO:0008236 serine-type peptidase activity molecular_function

KEGG:

id description
K01316 TMPRSS15, PRSS7; enterokinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU219581 lncRNA downstream 36822 543704 ~ 554212 (-) False LOC120544218
TU219584 lncRNA downstream 36822 543704 ~ 554212 (-) True LOC120544218
TU219579 lncRNA downstream 44886 543704 ~ 546148 (-) False LOC120544218
TU219721 lncRNA upstream 43726 676665 ~ 683561 (-) True G162293
TU219723 lncRNA upstream 74520 707459 ~ 708067 (-) True G162295
TU219700 lncRNA upstream 122782 755721 ~ 826383 (-) True G162278
TU219736 lncRNA upstream 131824 764763 ~ 765382 (-) True G162306
TU219738 lncRNA upstream 138555 771494 ~ 776493 (-) True G162307
XM_039777743.1 mRNA downstream 12185 570235 ~ 578849 (-) False ttc1
XM_039777742.1 mRNA downstream 12185 570235 ~ 578849 (-) True ttc1
XM_039777779.1 mRNA downstream 22325 560344 ~ 568709 (-) False pfdn1
XM_039777778.1 mRNA downstream 22325 560344 ~ 568709 (-) True pfdn1
XM_039777841.1 mRNA downstream 32112 544282 ~ 558922 (-) False LOC120544218
XM_039777844.1 mRNA upstream 3715 636654 ~ 663746 (-) True LOC120544220
XM_039777722.1 mRNA upstream 61326 694265 ~ 727005 (-) True LOC120544137
XM_039777771.1 mRNA upstream 145629 778568 ~ 783234 (-) True LOC120544167
XM_039777755.1 mRNA upstream 173212 806151 ~ 815589 (-) True LOC120544156
XM_039777845.1 mRNA upstream 196156 829095 ~ 844858 (-) False LOC120544221
TU219693 other downstream 19032 570252 ~ 572002 (-) False ttc1
TU219576 other downstream 32142 547619 ~ 558892 (-) False LOC120544218
TU219661 other downstream 117065 471092 ~ 473969 (-) False pwwp2a
TU219544 other downstream 453647 124348 ~ 137387 (-) False LOC120544212
TU219526 other downstream 490342 94636 ~ 100692 (-) False ndufa2
TU219748 other upstream 153832 786771 ~ 794731 (-) True G162311
TU219808 other upstream 484134 1117073 ~ 1118688 (-) True G162352
TU219825 other upstream 559863 1192802 ~ 1310616 (-) True G162358
TU219834 other upstream 563174 1196113 ~ 1201434 (-) True G162359
TU219891 other upstream 725247 1358186 ~ 1358523 (-) True G162396

Expression Profile