RNA id: unassigned_transcript_924



Basic Information


Item Value
RNA id unassigned_transcript_924
length 72
RNA type tRNA
GC content 0.60
exon number 1
gene id trnad-guc_9
representative True

Chromosome Information


Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 4756661 ~ 4756732 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTCCCCGACGGGGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU221444 lncRNA downstream 34667 4581742 ~ 4721994 (-) False G163391
TU221482 lncRNA downstream 51875 4692762 ~ 4704786 (-) True G163415
TU221445 lncRNA downstream 69285 4649926 ~ 4687376 (-) False G163391
TU221446 lncRNA downstream 69585 4650347 ~ 4687076 (-) False G163391
TU221460 lncRNA downstream 79869 4640511 ~ 4676792 (-) False LOC120544552
TU221502 lncRNA upstream 45977 4802709 ~ 4815755 (-) True G163422
TU221504 lncRNA upstream 49758 4806490 ~ 4814371 (-) True G163423
TU221526 lncRNA upstream 132903 4889635 ~ 4889841 (-) True G163444
TU221529 lncRNA upstream 145331 4902063 ~ 4902317 (-) True G163447
TU221532 lncRNA upstream 186444 4943176 ~ 4943391 (-) True G163450
XM_039778427.1 mRNA downstream 6231 4735214 ~ 4750430 (-) True LOC120544563
XM_039778430.1 mRNA downstream 6266 4717020 ~ 4750395 (-) True LOC120544564
XM_039778429.1 mRNA downstream 16732 4735214 ~ 4739929 (-) False LOC120544563
XM_039778431.1 mRNA downstream 32707 4717020 ~ 4723954 (-) False LOC120544564
XM_039778432.1 mRNA downstream 32861 4717020 ~ 4723800 (-) False LOC120544564
XM_039777871.1 mRNA upstream 223687 4980419 ~ 4981366 (-) True LOC120544239
XM_039777919.1 mRNA upstream 296623 5053355 ~ 5054317 (-) True LOC120544283
XM_039777920.1 mRNA upstream 305303 5062035 ~ 5062985 (-) True LOC120544284
XM_039777921.1 mRNA upstream 317024 5073756 ~ 5074691 (-) True LOC120544286
XM_039777925.1 mRNA upstream 325778 5082510 ~ 5083454 (-) True LOC120544289
TU221486 other downstream 15872 4735328 ~ 4740789 (-) False LOC120544563
TU221394 other downstream 263310 4491005 ~ 4493351 (-) True LOC120544568
TU221291 other downstream 341230 4334843 ~ 4415431 (-) False G163315
TU221281 other downstream 341230 4367059 ~ 4415431 (-) False G163315
TU221286 other downstream 354920 4366499 ~ 4401741 (-) True G163315
unassigned_transcript_925 other upstream 1706 4758438 ~ 4758509 (-) True trnad-guc_10
unassigned_transcript_926 other upstream 4694 4761426 ~ 4761496 (-) True trnag-gcc_2
unassigned_transcript_927 other upstream 5330 4762062 ~ 4762132 (-) True trnag-gcc_3
unassigned_transcript_928 other upstream 5900 4762632 ~ 4762702 (-) True trnag-gcc_4
unassigned_transcript_929 other upstream 9776 4766508 ~ 4766578 (-) True trnag-gcc_5