RNA id: TU233096


Basic Information

Item Value
RNA id TU233096
length 364
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G171986
representative True

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 1493231 ~ 1494317 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CACACTGAAGGTCCTCTGGTCCAGTTCCTCAGACTCCTCAGATAATGGCACATTCTCTCCACTTGCTGTAATATGGACCGGCACATCAGAGACTTTCTTGGTTCGTACCTCAGTCTTTACTTCATTCTTTTCCATGCTCTCGTCCTGTTTATGTACTGCCTCCAGAGGCTtggtttcttttttctcttttgtctcCTTTGTCTCTTTGATGTCCCAACTTTcctccttcttctcttttttgatctctttttctttaatcTCCCCCTCCCCTGATGAAGAAACTTCCTCCTGCTCAGGCTCCTcgtcttcatcctcctcctttAGCGCCACCCTGTCCGCTCTGCCCCGTCTGCTCGCTGTCTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU233063 lncRNA downstream 35617 1378242 ~ 1457614 (-) True G171959
TU233065 lncRNA downstream 35617 1378242 ~ 1457614 (-) False G171959
TU233062 lncRNA downstream 35617 1451207 ~ 1457614 (-) False G171959
TU233066 lncRNA downstream 119473 1369246 ~ 1373758 (-) True G171960
TU233051 lncRNA downstream 121497 1333823 ~ 1371734 (-) True G171949
TU233097 lncRNA upstream 518 1494835 ~ 1496527 (-) True G171987
TU233110 lncRNA upstream 63227 1557544 ~ 1557775 (-) True G172000
TU233173 lncRNA upstream 246707 1741024 ~ 1741430 (-) True G172053
TU233243 lncRNA upstream 452327 1946644 ~ 1946905 (-) True G172111
TU233287 lncRNA upstream 588491 2082808 ~ 2083242 (-) True G172150
XM_039780306.1 mRNA downstream 70072 1392764 ~ 1423159 (-) False syk
XM_039780304.1 mRNA downstream 70072 1392764 ~ 1423159 (-) True syk
XM_039780305.1 mRNA downstream 70190 1392764 ~ 1423041 (-) False syk
XM_039778830.1 mRNA downstream 309328 1174528 ~ 1183903 (-) True LOC120544936
XM_039779188.1 mRNA upstream 12237 1506554 ~ 1522474 (-) True reep5
XM_039779782.1 mRNA upstream 161031 1655348 ~ 1715953 (-) True nrg1
XM_039780006.1 mRNA upstream 252266 1746583 ~ 1794896 (-) True slc38a9
XM_039780008.1 mRNA upstream 252266 1746583 ~ 1794895 (-) False slc38a9
XM_039780007.1 mRNA upstream 252266 1746583 ~ 1794549 (-) False slc38a9
TU232928 other downstream 322442 1170203 ~ 1170789 (-) True G171868
TU233144 other upstream 102199 1596516 ~ 1602156 (-) True G172032
TU233470 other upstream 1490505 2984822 ~ 2985260 (-) True G172311
TU233826 other upstream 2392271 3886588 ~ 3943831 (-) True G172620
TU233934 other upstream 2647536 4141853 ~ 4147755 (-) False cdk9
TU234194 other upstream 3276500 4770817 ~ 4771303 (-) True G172920

Expression Profile