Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU233110 |
| length | 232 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G172000 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053128.1 |
| NCBI id | CM020925.1 |
| chromosome length | 37416781 |
| location | 1557544 ~ 1557775 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | description |
|---|---|
| ko00860 | Porphyrin and chlorophyll metabolism |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU233097 | lncRNA | downstream | 61017 | 1494835 ~ 1496527 (-) | True | G171987 |
| TU233096 | lncRNA | downstream | 63227 | 1493231 ~ 1494317 (-) | True | G171986 |
| TU233063 | lncRNA | downstream | 99930 | 1378242 ~ 1457614 (-) | True | G171959 |
| TU233065 | lncRNA | downstream | 99930 | 1378242 ~ 1457614 (-) | False | G171959 |
| TU233062 | lncRNA | downstream | 99930 | 1451207 ~ 1457614 (-) | False | G171959 |
| TU233173 | lncRNA | upstream | 183249 | 1741024 ~ 1741430 (-) | True | G172053 |
| TU233243 | lncRNA | upstream | 388869 | 1946644 ~ 1946905 (-) | True | G172111 |
| TU233287 | lncRNA | upstream | 525033 | 2082808 ~ 2083242 (-) | True | G172150 |
| TU233288 | lncRNA | upstream | 531938 | 2089713 ~ 2089979 (-) | True | G172151 |
| TU233317 | lncRNA | upstream | 532648 | 2090423 ~ 2097164 (-) | True | G172180 |
| XM_039779188.1 | mRNA | downstream | 35070 | 1506554 ~ 1522474 (-) | True | reep5 |
| XM_039780306.1 | mRNA | downstream | 134385 | 1392764 ~ 1423159 (-) | False | syk |
| XM_039780304.1 | mRNA | downstream | 134385 | 1392764 ~ 1423159 (-) | True | syk |
| XM_039780305.1 | mRNA | downstream | 134503 | 1392764 ~ 1423041 (-) | False | syk |
| XM_039778830.1 | mRNA | downstream | 373641 | 1174528 ~ 1183903 (-) | True | LOC120544936 |
| XM_039779782.1 | mRNA | upstream | 97573 | 1655348 ~ 1715953 (-) | True | nrg1 |
| XM_039780006.1 | mRNA | upstream | 188808 | 1746583 ~ 1794896 (-) | True | slc38a9 |
| XM_039780008.1 | mRNA | upstream | 188808 | 1746583 ~ 1794895 (-) | False | slc38a9 |
| XM_039780007.1 | mRNA | upstream | 188808 | 1746583 ~ 1794549 (-) | False | slc38a9 |
| XM_039780009.1 | mRNA | upstream | 188808 | 1746583 ~ 1782002 (-) | False | slc38a9 |
| TU232928 | other | downstream | 386755 | 1170203 ~ 1170789 (-) | True | G171868 |
| TU233144 | other | upstream | 38741 | 1596516 ~ 1602156 (-) | True | G172032 |
| TU233470 | other | upstream | 1427047 | 2984822 ~ 2985260 (-) | True | G172311 |
| TU233826 | other | upstream | 2328813 | 3886588 ~ 3943831 (-) | True | G172620 |
| TU233934 | other | upstream | 2584078 | 4141853 ~ 4147755 (-) | False | cdk9 |
| TU234194 | other | upstream | 3213042 | 4770817 ~ 4771303 (-) | True | G172920 |
