RNA id: TU233144



Basic Information


Item Value
RNA id TU233144
length 558
RNA type TUCP
GC content 0.49
exon number 7
gene id G172032
representative True

Chromosome Information


Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 1596516 ~ 1602156 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTTGTTTAAAACTTAAATGGACCACACCTGGGAAGCAGCATCTAGACGTCATGGACTTAGTAGAGGATTAAATACATACAGGCACTTGATGACGAAATGGCTCCAAAGATTTGTGGTGCCACAAATCTCCCATCCACAATTGATGATACTGAAGAGCTGACCACTGAGAGCAAGTGCATCCATACAGCCGTCAGCCACCCAAATCAGACCAGTCCAGAGCTCGGCCCTCTCATCAAGGTTGGACAGGCCCTTGATGACAAATTGGCTCCAAACATTTGTGGTGCCACAAATCCCCCATCCACAATTGATGATACTGAAGAGCTGACCACTGAGAGCAAGTGCATCCATACAGCTGTCAGCCACCCAAATCAGACCAGTCCAGAGCTCGGCCCTCTCACCAAGGCCCTTGATGACAAATTGGCTCCAAACATTTGTGGTGCCACAAATCCCCCATCCACAATTGATGATACTGAAGAGCTGACCACTGAGAGCAAGTGCATCTATACAGCCGTCAGCCACCCAAATCAGACCAGTCCAGAGCTCGGCCCTCTCACCAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU233110 lncRNA downstream 38741 1557544 ~ 1557775 (-) True G172000
TU233097 lncRNA downstream 99989 1494835 ~ 1496527 (-) True G171987
TU233096 lncRNA downstream 102199 1493231 ~ 1494317 (-) True G171986
TU233063 lncRNA downstream 138902 1378242 ~ 1457614 (-) True G171959
TU233065 lncRNA downstream 138902 1378242 ~ 1457614 (-) False G171959
TU233173 lncRNA upstream 138868 1741024 ~ 1741430 (-) True G172053
TU233243 lncRNA upstream 344488 1946644 ~ 1946905 (-) True G172111
TU233287 lncRNA upstream 480652 2082808 ~ 2083242 (-) True G172150
TU233288 lncRNA upstream 487557 2089713 ~ 2089979 (-) True G172151
TU233317 lncRNA upstream 488267 2090423 ~ 2097164 (-) True G172180
XM_039779188.1 mRNA downstream 74042 1506554 ~ 1522474 (-) True reep5
XM_039780306.1 mRNA downstream 173357 1392764 ~ 1423159 (-) False syk
XM_039780304.1 mRNA downstream 173357 1392764 ~ 1423159 (-) True syk
XM_039780305.1 mRNA downstream 173475 1392764 ~ 1423041 (-) False syk
XM_039778833.1 mRNA downstream 412613 1174528 ~ 1183903 (-) False LOC120544936
XM_039779782.1 mRNA upstream 53192 1655348 ~ 1715953 (-) True nrg1
XM_039780006.1 mRNA upstream 144427 1746583 ~ 1794896 (-) True slc38a9
XM_039780008.1 mRNA upstream 144427 1746583 ~ 1794895 (-) False slc38a9
XM_039780007.1 mRNA upstream 144427 1746583 ~ 1794549 (-) False slc38a9
XM_039780009.1 mRNA upstream 144427 1746583 ~ 1782002 (-) False slc38a9
TU232928 other downstream 425727 1170203 ~ 1170789 (-) True G171868
TU233470 other upstream 1382666 2984822 ~ 2985260 (-) True G172311
TU233826 other upstream 2284432 3886588 ~ 3943831 (-) True G172620
TU233934 other upstream 2539697 4141853 ~ 4147755 (-) False cdk9
TU234194 other upstream 3168661 4770817 ~ 4771303 (-) True G172920
XR_005636624.1 other upstream 3247792 4849948 ~ 4897357 (-) False odf2a

Expression Profile