RNA id: TU236085



Basic Information


Item Value
RNA id TU236085
length 305
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G174403
representative True

Chromosome Information


Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 12254818 ~ 12255275 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTTGCCCACCTGGACAGTGACATATGGATCGCTGGATCCTGTCTTGTCCTTTGCCTGAAGTCCTTGGGCACAAACGACTGTGATGGTGATCTTGGCCGACCACTTTGAGGTGCCGTCGAGTACACTCTGCTTGATGGTCTTCATCTGCTGCGCGTGGATGGCTTTGCTGATGATAAACACTTCCCTGATAAGTTCAAAGATTTCTGGTTTGTTCCTTTCCCTGATCTTCATTCTGTCCTTCATGGCCATGATAATGTTCTGGGTCCGGTCTTCAGCTCCATGCTTAGAGCTCTTCTCTGCAGCAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU235976 lncRNA downstream 488358 11766230 ~ 11766460 (-) True G174341
TU235970 lncRNA downstream 508398 11746071 ~ 11746420 (-) True G174335
TU235962 lncRNA downstream 593956 11660525 ~ 11660862 (-) True G174327
TU235960 lncRNA downstream 594994 11659436 ~ 11659824 (-) True G174325
TU235959 lncRNA downstream 633158 11621447 ~ 11621660 (-) True G174324
TU236114 lncRNA upstream 32139 12287414 ~ 12342288 (-) True G174430
TU236127 lncRNA upstream 154049 12409324 ~ 12416934 (-) True G174443
TU236186 lncRNA upstream 310427 12565702 ~ 12569571 (-) True G174481
TU236191 lncRNA upstream 310427 12565702 ~ 12569571 (-) False G174481
TU236195 lncRNA upstream 371932 12627207 ~ 12627427 (-) True G174482
XM_039780806.1 mRNA downstream 70335 12175383 ~ 12184483 (-) True LOC120546050
XM_039780753.1 mRNA downstream 81434 12163789 ~ 12173384 (-) False pigo
XM_039780754.1 mRNA downstream 81942 12162293 ~ 12172876 (-) True pigo
XM_039779879.1 mRNA downstream 140753 12077578 ~ 12114065 (-) True phf24
XM_039779881.1 mRNA downstream 140765 12077578 ~ 12114053 (-) False phf24
XM_039780330.1 mRNA upstream 56961 12312236 ~ 12318795 (-) True stbd1
XM_039779827.1 mRNA upstream 167559 12422834 ~ 12467165 (-) True musk
XM_039779828.1 mRNA upstream 167559 12422834 ~ 12455132 (-) False musk
XM_039779835.1 mRNA upstream 234976 12490251 ~ 12497952 (-) True si:busm1-57f23.1
XM_039780700.1 mRNA upstream 375950 12631225 ~ 12637494 (-) False tmem267
TU235941 other downstream 1090463 11161240 ~ 11164355 (-) False LOC120545042
TU235744 other downstream 2146535 10097376 ~ 10108283 (-) False gtf3c4
TU235686 other downstream 2380473 9861001 ~ 9874345 (-) False grin1a
TU235701 other downstream 2411319 9842812 ~ 9843499 (-) True G174120
TU235399 other downstream 3183610 9070162 ~ 9071208 (-) True G173900
TU236123 other upstream 101653 12356928 ~ 12357890 (-) True G174439
TU236126 other upstream 135280 12390555 ~ 12391484 (-) True G174442
TU236617 other upstream 2225187 14480462 ~ 14483417 (-) True G174799
TU236652 other upstream 2329424 14584699 ~ 14589020 (-) False G174827
TU236653 other upstream 2329424 14584699 ~ 14589020 (-) True G174827

Expression Profile