RNA id: TU236730



Basic Information


Item Value
RNA id TU236730
length 205
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G174869
representative True

Chromosome Information


Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 14989769 ~ 14989973 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CGGTGGCGATATATGGACGGTTAGGATTTACAAGTTTGTTTTTCCACCAAACGGCACTTGTAACTGCCCCCTACGTGGTGGTTATCAGATGAAAAATATTCTTGTCCTATATCAAGTCCGTCAGAGGTGATGTCCCTGTAGCGAGCTCCCCTCCTGCGCGTGCAGTCTCGAGCACTGGAAAATGAAAGCAGCTGCGTGCGGTTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU236684 lncRNA downstream 224286 14765283 ~ 14765483 (-) True G174838
TU236663 lncRNA downstream 328563 14636270 ~ 14661206 (-) False G174832
TU236662 lncRNA downstream 349806 14636270 ~ 14639963 (-) True G174832
TU236657 lncRNA downstream 405149 14579580 ~ 14584620 (-) True G174828
TU236378 lncRNA downstream 828605 14160119 ~ 14161164 (-) True G174644
TU236743 lncRNA upstream 121470 15111443 ~ 15111877 (-) False G174881
TU236744 lncRNA upstream 121470 15111443 ~ 15112463 (-) True G174881
TU236755 lncRNA upstream 157524 15147497 ~ 15147737 (-) True G174889
TU236771 lncRNA upstream 164021 15153994 ~ 15154734 (-) True G174905
TU236788 lncRNA upstream 380471 15370444 ~ 15370759 (-) True G174920
XM_039780398.1 mRNA downstream 184270 14799973 ~ 14805499 (-) False LOC120545803
XM_039780395.1 mRNA downstream 184270 14799973 ~ 14805499 (-) True LOC120545803
XM_039780396.1 mRNA downstream 184581 14799973 ~ 14805188 (-) False LOC120545803
XM_039780394.1 mRNA downstream 184594 14799973 ~ 14805175 (-) False LOC120545803
XM_039780399.1 mRNA downstream 184690 14799973 ~ 14805079 (-) False LOC120545803
XM_039780299.1 mRNA upstream 106313 15096286 ~ 15108208 (-) True crkl
XM_039778873.1 mRNA upstream 122643 15112616 ~ 15117182 (-) True si:ch211-222n4.2
XM_039778874.1 mRNA upstream 122643 15112616 ~ 15117181 (-) False si:ch211-222n4.2
XM_039780053.1 mRNA upstream 127940 15117913 ~ 15142429 (-) False ulk1b
XM_039780052.1 mRNA upstream 127940 15117913 ~ 15142429 (-) True ulk1b
TU236652 other downstream 400749 14584699 ~ 14589020 (-) False G174827
TU236653 other downstream 400749 14584699 ~ 14589020 (-) True G174827
TU236655 other downstream 400749 14584699 ~ 14589020 (-) False G174827
TU236617 other downstream 506352 14480462 ~ 14483417 (-) True G174799
TU236126 other downstream 2598285 12390555 ~ 12391484 (-) True G174442
TU236877 other upstream 660764 15650737 ~ 15654486 (-) True G175000
TU236878 other upstream 661280 15651253 ~ 15654486 (-) False G175000
TU237211 other upstream 1493953 16483926 ~ 16499971 (-) True G175225
XR_005636626.1 other upstream 1580566 16570539 ~ 16594366 (-) False ptgdsa
TU237501 other upstream 2340983 17330956 ~ 17332475 (-) True G175452

Expression Profile