RNA id: XM_039778844.1


Basic Information

Item Value
RNA id XM_039778844.1
length 4147
RNA type mRNA
GC content 0.46
exon number 8
gene id slc26a1
representative False

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 14329227 ~ 14341431 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AAGCAGGAAGAAGCCAGAAGCAGTCAGTGAGCAGCAGAGTGGACGGCTGTATAGACAAAAACAGGCTGATGGTGGATGCAGCAGCACCAGCCAGGGAGGTATGGCTGGTGTTGCCTCCTGTTTGCTCCTCTCGTCCAGTCTGGGAGCACAGCTGACAACAATATCCACCTCCCCGTCCCTCTTCCTCTCACCTTGTTGCATCCTCTTCCTACCTGGGACCATGGAGGAGGTCACTAAAGTCACACCACCTCTCCTGGAACGCCGGGCTCGGCAGCGACAGCCCACGGTATCAGTCCTCAAATCCAAGCTGAAGCAGGGTGTGACCTGCTCCGGGCCCAGAGTCCGATCCACCCTGACCGGGTTCTTCCCCGTTGTGCGCTGGCTGCCTAAATACAATCTCCGAGAATATGTCTGGGGCGATCTAATGTCCGGGGTAATTGTTGGTATCATCTTGGTACCGCAGGCCATCGCCTACTGCCTGCTGGCCGGAGTGGAGCCCATCTATGGTTTATACACCTCATTTTACGCCAACATCATCTACTTCCTCATGGGGACGTCTAGACATGTCTCTGTGGGGATCTTCAGCCTCATGAGCCTCATGGTTGGACAGGTGGTGGATAAGGAGATGTTCCTGGCAGGTTTTGATCTCAATGAGGACTCTGGCCCTGATGCGTTCAATGCCACACTGGGCATTAACCTTACGGCTGGTAAACTTCACAGTGTGGAGCTAATGGGTCTGCAATGTGGGAGGGAGTGTTACTCCATCAGCATCGCTGCTGCCCTTACATTCCTGGCTGGCGTCTATCAGCTCATAATGGCCGTGTTTCGGCTAGGCTTCGTCTCTGTATACCTTTCGTCCCCTATGCTCGATGGTTTTGCCACAGGAGCCTCTTTTACCATCCTCACCGTGCAGGCTAAATACCTGTTGGGTCTAAAGATCCCCCGTCATCAGGGCTATGGCACAGTTGTCGTCACCTGGATCAACATCTTCGCCAACATTCATAAGACCAACCTGTGTGACCTCATCACGAGCGCCATCTCTATCTCTGTATTAGtgGCAGGGAAAGAGATCCAGGAGCGCTACAAAGAGCGTCTAAAGATCCCTCTGCCGACTGAGCTGATAGTAGTGGCAGGAGCTACGCTGGCCAGCCATTTTGGGGAACTGAACAGCAATTATGGCTCCAGTGTTTCCGGTCACATCCCCACAGGGTTCATTGCTCCTCAGGTGCCCAGCTTTAGTCTGATGCCACGGTTGGCACTGGATGCCATTCCTCTGGCTGTCATTAGTTTTGCCTTCACGGTGTCGCTGTCCGAGATGTTTGCGAAGAAAAACGGCTATACGGTTCGCCCCAACCAGGAGATGCTGGCCATCAGCTTTTGTAACATCATCCCCTCCTTCTTCCGCTGTTTCACCACCAGTGCAGCATTGGCAAAAACCATGGTGAAGGACTCAACAGGCTGCCAGACACAGATCTCCAGTCTGATCAGCGCCCTGGTCGTCCTTCTCGTCGTCCTCTACTTCGCGCCTTTCTTCTACGCTCTCCAGAAGTGTGTTCTTGCCTGTATCATCATTGTAAGCCTTAGGGGGGCGCTGAGGAAGTTTAAGGATATCCCGGCTAAGTGGCGTGCCAGCCGGAACGACGGCATAGTTTGGCTGGTCACCATGTCAGCCACGGCTCTGATCAGTGTGGAGCTGGGCCTCCTGGTCGGAATAGTTTTTTCCATGATCTGCATCATCTTCAAGACCCAGAACCCCAAGGTTTCTCTCCTGGGCCGAGCCAATGACACCGATCTTTACGAAGACATGGACGAGTACAAGAACCTCATGCCACCACCTCGGGTTCATGTCTTCCGCTTCCAGTCTCCCCTGTACTACGCGAATAAGGACTCATTCCTCAGATCCCTCTACAAAGCTGTCGGAGTTGAACCTTTCTTGGAGCTGACTAAGAGAAGAAAGGCAGAGAAGAAGGCCAAAGAGATGTCCTCGAAGCAGGCCAAGGCAAACGGGGATAAAAACAACGGAGAGGTCGTCATTGGACTCATTCAAAGAGAACTGGATTTCCACACGATGGTCTTGGACTGCTCTGCCATCCCCTTCATAGACTCGACAGGCATGGCCACATTTAAAGGGCTGGTCAAGGAATATAAAGAGATAGGGGTGAGCATGCTCTTTGCCAACTGTAACACCTCAGTTATTGATACCCTGCAGAAGGGACAATTCTTTGGGGAAAATGACAAAGACATGAGCAGCCTGCTGTTTCATACAGTTCACGCTGCAGTTCTTCATGCAAACAGTACATCTACAGAAAGCAAGTCAGAAGACTCTGTGGTATAGAGCAGCTAGAAGGACAGGGAAGTTAGGTATGCTATCTTGCCACCTATACAAATAATGCATTAGGTAGCTTTGAGGTAGCCTTTTGGGAAGCTTTGTCCAAGAAAACACGGCAGTACCAAGAATGTTCGATAAGGAAGAGTATTCCACCAAGTACATTTTTGATGCTTTGCACCTTTAAAGAACCGGACCACATGATCTGCTaaataagcatttttttttcaagataaaAATTTTTTAATGCAATTTTATTGCTGGAAAAGGGCCATTTCATTAAATATGCCATCTGTGCACTAGAAAGGTGCAATTATTTTGTTAAACTGATGCCCCCAAAACATTGTGTCACATTAGCGATTGCTCTCAGGGGCGTAGcccaaaattctgggccctgtagaaaggcattttctatgggcctctccccgcatccacagctattcattctagcatctttttgggccctcctcacatgagggccctgggtcccctttttccccccagtccgacgcccctgatTGCTCTAATtatatctaatctaatctaattataTGATATAATTCCATTACATCATAAAACTACTTTTTCCAAATACACTGGTATTTTAATACCAGTTCTTCTAGCAACAATAAGGGAGACAGAATGTTTTGCAAGTTTAGTTAGTAGAAGATGCTCCTTCATTACCTTCCTCAGCGACAGCTTTACAAAAAAATGAGTGTGGTTCAGCCAGACCTCCTGCCGTCCAGGTTTTTGTGTCAATACAGAGGACGAAAAGACAAAGTATCACAAAATGACCTGCTGCCAGCCAATAATGGTAACAACAGGACAGATACAAGGCCCGACATAGTCAAAGAATAACTACAATAAGTAACAGGTTTGTTCCTATAAAGTTGCTGATTATTACCTGTGTCACTGTCAAAAGCAATGCTCATTGCAATAAAAGCAGTTTTAACTTTTTGTATCACTTGAAGCCTTTGGCCAAAGTCCATAATGGCTCTTATCCAGGATTCCAGAGTTCAGACATGGGGATTCAGCCACTATCAGTGGTATTTCCTGTGGTGCCAGCTATTATGTACATGCAACCtcaaaatcatttctaaaaGGCCAGTTAAATGCTTCCTGGCTTGAAGAAGAAGCACTTGTGCATGGCAGGAAGAGAAGCGTCTCGTGACTCACGAGGACTGAGTGCTTTCTCAGACTTAGGCTGAATCCGAATCTTAGTCTTACACAGAGAGAGCCTTGCCTCCAAAACCTGGCCTCATTACAAGATACCTGCCCTGTTTCCTGGTCACCTAACAATGACAGCTATATCTGTTCTAGATATGTTCTTGGTAGAAAAAAATTGCTCAATGAAAGCAAGTCATCATTTTGTGCTTCTGAAATTTATATTAAAACTGATGGCAGCAGGTGATGCCACTTATTTTATCTAAATGGTTCGCTGCCACCGGTTtgttaaatcaaatgttttgtgACTTGCAAACTAAGAGCAGATTTTGTCTCTTTCTTATTAAATCACTGTTTATAGTTATGTCTTTCATCCCGTTGCTGCCAAGTGCAAAACTTGaattaaaacaataacaatGTCTAGGAAGTACCCTATGTATGTAATCCTTCAAAAAGgatgtatttttacttttactacttCATCAGTGATAAAATGTAGACATTCATATTTGTAAATTTAGAAGATtatcattttgtattttaataatCTTGTTTTGTCATCAAACGTTTTTTCCACGcattattttaaagtgctcatattatgcttttgggctttttccctttcctttatagttttatatatcttttttgtgcacg

Function

GO:

id name namespace
GO:1902358 sulfate transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008271 secondary active sulfate transmembrane transporter activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU236378 lncRNA downstream 168063 14160119 ~ 14161164 (-) True G174644
TU236379 lncRNA downstream 168158 14160072 ~ 14161069 (-) False G174644
TU236363 lncRNA downstream 192051 14135438 ~ 14137176 (-) True G174629
TU236361 lncRNA downstream 193973 14132855 ~ 14135254 (-) True G174627
TU236331 lncRNA downstream 372027 13955268 ~ 13957200 (-) True G174606
TU236657 lncRNA upstream 238149 14579580 ~ 14584620 (-) True G174828
TU236662 lncRNA upstream 294839 14636270 ~ 14639963 (-) True G174832
TU236663 lncRNA upstream 294839 14636270 ~ 14661206 (-) False G174832
TU236684 lncRNA upstream 423852 14765283 ~ 14765483 (-) True G174838
TU236730 lncRNA upstream 648338 14989769 ~ 14989973 (-) True G174869
XM_039778841.1 mRNA downstream 12104 14301598 ~ 14317123 (-) False antxr2b
XM_039778840.1 mRNA downstream 12106 14301598 ~ 14317121 (-) True antxr2b
XM_039779786.1 mRNA downstream 88051 14239204 ~ 14241176 (-) False LOC120545458
XM_039779785.1 mRNA downstream 88051 14239204 ~ 14241176 (-) True LOC120545458
XM_039779784.1 mRNA downstream 95881 14210874 ~ 14233346 (-) True LOC120545456
XM_039779892.1 mRNA upstream 18085 14359516 ~ 14423313 (-) False si:dkey-247m21.3
XM_039779891.1 mRNA upstream 18085 14359516 ~ 14423313 (-) True si:dkey-247m21.3
XM_039779904.1 mRNA upstream 150699 14492130 ~ 14574024 (-) True tnksa
XM_039779905.1 mRNA upstream 151305 14492736 ~ 14574024 (-) False tnksa
XM_039780594.1 mRNA upstream 250857 14592288 ~ 14624902 (-) False si:dkey-88l16.3
TU236126 other downstream 1937743 12390555 ~ 12391484 (-) True G174442
TU236123 other downstream 1971337 12356928 ~ 12357890 (-) True G174439
TU235941 other downstream 3164872 11161240 ~ 11164355 (-) False LOC120545042
TU235744 other downstream 4220944 10097376 ~ 10108283 (-) False gtf3c4
TU235686 other downstream 4454882 9861001 ~ 9874345 (-) False grin1a
TU236617 other upstream 139031 14480462 ~ 14483417 (-) True G174799
TU236652 other upstream 243268 14584699 ~ 14589020 (-) False G174827
TU236653 other upstream 243268 14584699 ~ 14589020 (-) True G174827
TU236655 other upstream 243268 14584699 ~ 14589020 (-) False G174827
TU236877 other upstream 1309306 15650737 ~ 15654486 (-) True G175000

Expression Profile