Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039778900.1 |
| length | 1277 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 9 |
| gene id | exosc2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053128.1 |
| NCBI id | CM020925.1 |
| chromosome length | 37416781 |
| location | 19441576 ~ 19447599 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0000178 | exosome (RNase complex) | cellular_component |
| GO:0003723 | RNA binding | molecular_function |
| id | description |
|---|---|
| K03679 | RRP4, EXOSC2; exosome complex component RRP4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU238449 | lncRNA | upstream | 39209 | 19399170 ~ 19402367 (+) | False | LOC120545529 |
| TU238220 | lncRNA | upstream | 587028 | 18851078 ~ 18854548 (+) | True | G175973 |
| TU238221 | lncRNA | upstream | 604822 | 18836175 ~ 18836754 (+) | True | G175974 |
| TU238139 | lncRNA | upstream | 754848 | 18676044 ~ 18686728 (+) | False | srsf9 |
| TU238127 | lncRNA | upstream | 767611 | 18670383 ~ 18673965 (+) | True | G175925 |
| TU238472 | lncRNA | downstream | 40711 | 19488310 ~ 19492082 (+) | True | G176173 |
| TU238477 | lncRNA | downstream | 48437 | 19496036 ~ 19502184 (+) | True | G176177 |
| TU238529 | lncRNA | downstream | 115647 | 19563246 ~ 19565919 (+) | True | G176225 |
| TU238530 | lncRNA | downstream | 119340 | 19566939 ~ 19567169 (+) | True | G176226 |
| XR_005636770.1 | lncRNA | downstream | 143143 | 19590742 ~ 19593712 (+) | True | LOC120546000 |
| XM_039779932.1 | mRNA | upstream | 39197 | 19380250 ~ 19402379 (+) | True | LOC120545529 |
| XM_039780434.1 | mRNA | upstream | 119337 | 19318972 ~ 19322239 (+) | True | mlana |
| XM_039780433.1 | mRNA | upstream | 119337 | 19318977 ~ 19322239 (+) | False | mlana |
| XM_039780486.1 | mRNA | upstream | 166943 | 19273397 ~ 19274633 (+) | True | LOC120545863 |
| XM_039780159.1 | mRNA | upstream | 228111 | 19195657 ~ 19213465 (+) | True | rfx3 |
| XM_039778896.1 | mRNA | downstream | 1964 | 19449563 ~ 19486106 (+) | False | abl1 |
| XM_039778897.1 | mRNA | downstream | 1964 | 19449563 ~ 19486106 (+) | False | abl1 |
| XM_039778898.1 | mRNA | downstream | 19452 | 19467051 ~ 19486106 (+) | True | abl1 |
| XM_039778899.1 | mRNA | downstream | 19454 | 19467053 ~ 19486106 (+) | False | abl1 |
| XM_039780631.1 | mRNA | downstream | 69211 | 19516810 ~ 19525324 (+) | True | ddx54 |
| TU238450 | other | upstream | 54134 | 19380277 ~ 19387442 (+) | False | LOC120545529 |
| TU238143 | other | upstream | 717791 | 18676044 ~ 18723785 (+) | True | srsf9 |
| TU238138 | other | upstream | 754848 | 18676044 ~ 18686728 (+) | False | srsf9 |
| TU238154 | other | upstream | 754848 | 18676044 ~ 18686728 (+) | False | srsf9 |
| XR_005636603.1 | other | upstream | 893435 | 18536631 ~ 18548141 (+) | True | myo1hb |
| unassigned_transcript_963 | other | downstream | 69636 | 19517235 ~ 19517306 (+) | True | trnac-gca_32 |
| TU238926 | other | downstream | 1499085 | 20946684 ~ 20947055 (+) | True | G176526 |
| TU239244 | other | downstream | 2831281 | 22278880 ~ 22282163 (+) | True | G176753 |
| TU239368 | other | downstream | 3048814 | 22496413 ~ 22524368 (+) | True | LOC120545252 |
| TU239380 | other | downstream | 3084309 | 22531908 ~ 22537337 (+) | False | G176870 |
