RNA id: XM_039779284.1



Basic Information


Item Value
RNA id XM_039779284.1
length 1339
RNA type mRNA
GC content 0.47
exon number 3
gene id esm1
representative True

Chromosome Information


Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 22812118 ~ 22814146 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTGGATGGCGGTCCAGAGTTAATCCCACTTCCATGCCGGATTTCTAAAAAGGGGGCTGACTGGCAAAAAGGACGACAACACCGGAATGAGGAAATTGACAAGGGCAAGCAACGTGCAAAAACAAAGTTGTTCATCGCTGATAACCATACAACCTGATGAACCAGAGGTCACTCCACTGACTCAAGTCTGCCAGAGGTGGTCCgcttctctgtctcctcttcccGAGACATCCAAAAGACAGCAGCCCTTTCACGAGCTCTCTGCCTGCATCCCGGGATGTCATTTCTCCTCATCACAGTGCTGTCTTCACTCATAGTGCAAGATGCTGAGGCGTGGGGCGCCAATGTCAAGTACGCGGTGAACTGCCCCGACAGATGCAACGTGGAGCGGTGTGGCGGGACACAGCGGTGCACACGGACGGTCCTGGATGACTGCGGCTGTTGCCAGGTCTGTGCAGCCGGCAGAGGGGAGCACTGCTACCGCACAGTGTCGGGGATGCACGGGGTGAAGTGCGGACCGGGATTATTCTGCGAGTTCTACAAGGATGAGGACGATTATGGAGACGAATATGGGATTTGCAGAGACTGCCTGTATGGAACCTATGGGGTTGAGTGCCGCAAGACATGCAACTGCAAAGGTAGCATATGTGACAGGGAGACAGGAGCGTGTCTCACCCTCAAATTCTTTGCCAAAATCGCCAGCAAACTCAAGACTGAGCCTCAAGCAGGAGGAGAGGTGGGCTCAGGAGAGGTCAGCACTCCCCAGAACCCAGATCAACACACGGAAAGATCCACCGCTCCAAAGCGGCTCAACCCTCGCTGACAAGTGCTGACAAGACTGAATCTATTCAGTGTAAATGTAGCATTAACTTATAAATGAACTGAaagatatattttattatgttaaaCGATGAACAACTTTTTTACAGCAGTTTGGAAGTTTTATTTGGTTTGTTTGGTCCTCGTTTTGACACAAGCATCTTTTCTAATGAAATAAGCAGACTATGTTGTTCTCTTCAAATTCTCTGTTCCTCTGTTAGTGTTCATCATCCGTTCCTCAAGATGATCCTTTAGGCTGTTCCCATCTGATTGTAGTGTGCCCTCACTCATACAATATTGTTGAGAACATGAGAGTTAATGGCACAAGAAAAGGaacttgcatttattttcaaactggacACAGCAATATCTTTCATCGACGCATTGTAGTCCAACAAGTTTTCCAAAATGATATTttatgtgtactgtatatatgaaaAGCGGACATGGAAAATATCATGTATATGGCACCAGCCAATGTAAAGAACGCTCTTACAATTAAAACCAAAGTTATGACTGAC

Function


GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG:

id description
K25036 ESM1; endothelial cell-specific molecule 1

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU239429 lncRNA upstream 64792 22747108 ~ 22747326 (+) True G176908
TU239427 lncRNA upstream 97621 22713906 ~ 22714497 (+) True G176906
TU239426 lncRNA upstream 105994 22705726 ~ 22706124 (+) True G176905
TU239425 lncRNA upstream 150300 22661584 ~ 22661818 (+) True G176904
TU239424 lncRNA upstream 157293 22654610 ~ 22654825 (+) True G176903
TU239531 lncRNA downstream 79010 22893156 ~ 22933645 (+) True G176974
TU239630 lncRNA downstream 290496 23104642 ~ 23116716 (+) True G177039
TU239631 lncRNA downstream 290496 23104642 ~ 23116716 (+) False G177039
TU239635 lncRNA downstream 320503 23134649 ~ 23134887 (+) True G177043
TU239683 lncRNA downstream 327583 23141729 ~ 23141935 (+) True G177079
XM_039779438.1 mRNA upstream 287713 22496714 ~ 22524405 (+) False LOC120545252
XM_039779440.1 mRNA upstream 287713 22515469 ~ 22524405 (+) False LOC120545252
XM_039779439.1 mRNA upstream 287713 22522848 ~ 22524405 (+) False LOC120545252
XM_039779312.1 mRNA upstream 340570 22439803 ~ 22471548 (+) False nedd4l
XM_039779009.1 mRNA downstream 10154 22824300 ~ 22892523 (+) True arhgap24
XM_039779010.1 mRNA downstream 53366 22867512 ~ 22892523 (+) False arhgap24
XM_039779011.1 mRNA downstream 64637 22878783 ~ 22892523 (+) False arhgap24
XM_039779012.1 mRNA downstream 69307 22883453 ~ 22892523 (+) False arhgap24
XM_039779013.1 mRNA downstream 71923 22886069 ~ 22892523 (+) False arhgap24
TU239380 other upstream 274781 22531908 ~ 22537337 (+) False G176870
TU239368 other upstream 287750 22496413 ~ 22524368 (+) True LOC120545252
TU239244 other upstream 529955 22278880 ~ 22282163 (+) True G176753
TU238926 other upstream 1865063 20946684 ~ 20947055 (+) True G176526
unassigned_transcript_963 other upstream 3294812 19517235 ~ 19517306 (+) True trnac-gca_32
TU239589 other downstream 192121 23006267 ~ 23008812 (+) False klhl8
TU239701 other downstream 368527 23182673 ~ 23184262 (+) True G177094
XR_005636689.1 other downstream 626844 23440990 ~ 23458605 (+) True hnrpkl
TU239996 other downstream 909354 23723500 ~ 23727242 (+) True rpl37
XR_005636817.1 other downstream 910020 23724166 ~ 23724245 (+) True LOC120546142

Expression Profile