Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039782877.1 |
| length | 943 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 3 |
| gene id | srp9 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 3891637 ~ 3893175 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | biological_process |
| GO:0045900 | negative regulation of translational elongation | biological_process |
| GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | cellular_component |
| GO:0008312 | 7S RNA binding | molecular_function |
| id | description |
|---|---|
| K03109 | SRP9; signal recognition particle subunit SRP9 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246684 | lncRNA | downstream | 21938 | 3867864 ~ 3869699 (-) | True | G182028 |
| TU246683 | lncRNA | downstream | 25277 | 3866017 ~ 3866360 (-) | True | G182027 |
| TU246674 | lncRNA | downstream | 60240 | 3830750 ~ 3831397 (-) | True | G182018 |
| TU246659 | lncRNA | downstream | 136369 | 3752653 ~ 3755268 (-) | False | G182004 |
| TU246768 | lncRNA | upstream | 199248 | 4092423 ~ 4092630 (-) | True | G182099 |
| TU246774 | lncRNA | upstream | 209600 | 4102775 ~ 4103572 (-) | True | G182105 |
| XR_005637042.1 | lncRNA | upstream | 264516 | 4157691 ~ 4162110 (-) | True | LOC120547275 |
| TU246823 | lncRNA | upstream | 390785 | 4283960 ~ 4284159 (-) | True | G182137 |
| TU246841 | lncRNA | upstream | 501398 | 4394573 ~ 4395005 (-) | True | G182155 |
| XM_039782383.1 | mRNA | downstream | 987 | 3884965 ~ 3890650 (-) | True | ephx1 |
| XM_039782384.1 | mRNA | downstream | 7024 | 3875160 ~ 3884613 (-) | True | LOC120547034 |
| XM_039782435.1 | mRNA | downstream | 70798 | 3773170 ~ 3820839 (-) | False | ankrd6b |
| XM_039782648.1 | mRNA | upstream | 284398 | 4177573 ~ 4184958 (-) | True | LOC120547172 |
| XM_039782653.1 | mRNA | upstream | 301968 | 4195143 ~ 4196360 (-) | True | LOC120547177 |
| XM_039782615.1 | mRNA | upstream | 467027 | 4360202 ~ 4400599 (-) | True | LOC120547149 |
| XM_039782345.1 | mRNA | upstream | 514813 | 4407988 ~ 4475102 (-) | True | ube2j1 |
| XM_039782655.1 | mRNA | upstream | 587654 | 4480829 ~ 4485479 (-) | True | LOC120547180 |
| TU246538 | other | downstream | 281308 | 3608847 ~ 3610329 (-) | True | G181919 |
| TU246464 | other | downstream | 515529 | 3375765 ~ 3376108 (-) | True | G181860 |
| unassigned_transcript_1007 | other | downstream | 3037414 | 854151 ~ 854223 (-) | True | trnav-aac_19 |
| unassigned_transcript_1005 | other | downstream | 3043804 | 847762 ~ 847833 (-) | True | trnad-guc_21 |
| unassigned_transcript_1002 | other | downstream | 3049612 | 841954 ~ 842025 (-) | True | trnad-guc_20 |
| TU246726 | other | upstream | 13442 | 3906617 ~ 3912279 (-) | True | G182061 |
| TU246722 | other | upstream | 15372 | 3908547 ~ 3914015 (-) | True | G182059 |
| TU246771 | other | upstream | 206835 | 4100010 ~ 4100480 (-) | True | G182102 |
| unassigned_transcript_1013 | other | upstream | 255732 | 4148907 ~ 4148978 (-) | True | trnav-aac_20 |
| unassigned_transcript_1014 | other | upstream | 262585 | 4155760 ~ 4155832 (-) | True | trnav-aac_21 |
