Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU249130 |
| length | 389 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 3 |
| gene id | ost4 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 12907302 ~ 12908747 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005636849.1 | lncRNA | downstream | 21540 | 12884370 ~ 12885775 (-) | True | LOC120546274 |
| TU249054 | lncRNA | downstream | 276523 | 12588138 ~ 12630792 (-) | True | G183910 |
| TU249051 | lncRNA | downstream | 280609 | 12592618 ~ 12626706 (-) | True | G183908 |
| TU249036 | lncRNA | downstream | 347540 | 12540583 ~ 12559775 (-) | False | G183898 |
| TU249037 | lncRNA | downstream | 347540 | 12557510 ~ 12559775 (-) | True | G183898 |
| TU249160 | lncRNA | upstream | 125505 | 13034252 ~ 13034497 (-) | True | G183981 |
| TU249196 | lncRNA | upstream | 236717 | 13145464 ~ 13215824 (-) | True | hmgn3 |
| TU249225 | lncRNA | upstream | 340844 | 13249591 ~ 13250436 (-) | True | G184026 |
| TU249235 | lncRNA | upstream | 347239 | 13255986 ~ 13257962 (-) | False | runx2b |
| TU249249 | lncRNA | upstream | 409741 | 13318488 ~ 13318930 (-) | True | G184049 |
| XM_039781113.1 | mRNA | downstream | 159577 | 12746386 ~ 12747738 (-) | False | LOC120546273 |
| XM_039781112.1 | mRNA | downstream | 159577 | 12746386 ~ 12747738 (-) | True | LOC120546273 |
| XM_039781288.1 | mRNA | downstream | 204131 | 12695937 ~ 12703184 (-) | True | ccnk |
| XM_039781289.1 | mRNA | downstream | 204335 | 12695937 ~ 12702980 (-) | False | ccnk |
| XM_039781095.1 | mRNA | downstream | 549084 | 12032317 ~ 12358231 (-) | False | nrxn3b |
| XM_039782683.1 | mRNA | upstream | 38211 | 12946958 ~ 12948322 (-) | True | LOC120547205 |
| XM_039782685.1 | mRNA | upstream | 47726 | 12956473 ~ 12957811 (-) | False | LOC120547206 |
| XM_039782684.1 | mRNA | upstream | 47726 | 12956473 ~ 12957811 (-) | True | LOC120547206 |
| XM_039782688.1 | mRNA | upstream | 52903 | 12961650 ~ 12963019 (-) | False | LOC120547209 |
| XM_039782689.1 | mRNA | upstream | 52903 | 12961650 ~ 12963016 (-) | False | LOC120547209 |
| unassigned_transcript_1080 | other | downstream | 324074 | 12583169 ~ 12583241 (-) | True | trnat-ugu_2 |
| TU248695 | other | downstream | 1532700 | 11374108 ~ 11374615 (-) | True | G183650 |
| XR_005636937.1 | other | downstream | 2296690 | 10501920 ~ 10610625 (-) | False | LOC120546776 |
| TU248535 | other | downstream | 2385905 | 10520717 ~ 10521410 (-) | True | G183528 |
| TU248390 | other | downstream | 2806254 | 10099603 ~ 10101061 (-) | False | LOC120546281 |
| TU249125 | other | upstream | 51751 | 12960498 ~ 13007868 (-) | True | LOC120547209 |
| TU249198 | other | upstream | 285330 | 13194077 ~ 13215824 (-) | False | hmgn3 |
| TU249194 | other | upstream | 297560 | 13206307 ~ 13215824 (-) | False | hmgn3 |
| TU249195 | other | upstream | 297560 | 13206307 ~ 13215824 (-) | False | hmgn3 |
| TU249197 | other | upstream | 297560 | 13206307 ~ 13215824 (-) | False | hmgn3 |
