RNA id: TU249475



Basic Information


Item Value
RNA id TU249475
length 444
lncRNA type sense_over
GC content 0.48
exon number 2
gene id G184224
representative True

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14249214 ~ 14328936 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ttatctctCTtatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgcatgtgcatgtgtgcattctATATGCATGAACATGTACTGCAAATATGTATGTTTCCTTGGTCTATGCTTGCAAATGAGCGTGTCTCTATTTCTGTACATGTATGTGATGGCAGCTTagagcacacacactcataaaccCATGGCATGGCCTGGCCAGCTGGGTCTCGATGTTAATGTTCAGTGGAGCTGGGAGTTTCTGTGTGAGCTCAGTCAGACGCACTGCATCGCCCTGTCTCTCCATATGGGACCCTCCTGGCTGCTCTGCACATCACAGCTCCAGCCGCTGCAGGCAATTGTGTTGAATTGTAATCTCTTTAAAGCATGACAGCAAAGTCTGAAACAGTAGTAACGTCTACCACCC

Function


GO: NA

KEGG:

id description
ko04724 Glutamatergic synapse
ko04713 Circadian entrainment
ko05033 Nicotine addiction

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005636876.1 lncRNA downstream 5939 14238426 ~ 14243275 (-) True LOC120546499
TU249450 lncRNA downstream 17509 14187428 ~ 14231705 (-) True G184208
TU249466 lncRNA downstream 23995 14222975 ~ 14225219 (-) True G184217
TU249445 lncRNA downstream 107408 14119022 ~ 14141806 (-) True G184204
TU249399 lncRNA downstream 406737 13842272 ~ 13842477 (-) True G184162
TU249559 lncRNA upstream 64511 14393447 ~ 14394111 (-) True G184286
TU249562 lncRNA upstream 80052 14408988 ~ 14409257 (-) True G184289
TU249563 lncRNA upstream 85320 14414256 ~ 14416171 (-) True G184290
TU249564 lncRNA upstream 87936 14416872 ~ 14417248 (-) True G184291
TU249565 lncRNA upstream 94217 14423153 ~ 14424847 (-) True G184292
XM_039782651.1 mRNA downstream 261813 13981265 ~ 13987401 (-) True bmp2b
XM_039782650.1 mRNA downstream 292076 13946704 ~ 13957138 (-) False fermt1
XM_039782649.1 mRNA downstream 292077 13946704 ~ 13957137 (-) True fermt1
XM_039782334.1 mRNA downstream 304381 13938613 ~ 13944833 (-) True trmt6
XM_039781103.1 mRNA downstream 331090 13911571 ~ 13918124 (-) True LOC120546266
XM_039782360.1 mRNA upstream 6703 14335639 ~ 14359390 (-) False LOC120547016
XM_039782357.1 mRNA upstream 6703 14335639 ~ 14359390 (-) False LOC120547016
XM_039782358.1 mRNA upstream 6703 14335639 ~ 14359390 (-) False LOC120547016
XM_039782359.1 mRNA upstream 6703 14335639 ~ 14359390 (-) False LOC120547016
XM_039782356.1 mRNA upstream 6703 14335639 ~ 14359390 (-) True LOC120547016
TU249319 other downstream 758086 13481924 ~ 13491128 (-) False mfsd2b
TU249306 other downstream 781149 13458616 ~ 13468065 (-) True fkbp1b
TU249194 other downstream 1033390 13206307 ~ 13215824 (-) False hmgn3
TU249578 other upstream 143265 14472201 ~ 14498370 (-) True G184299
TU249614 other upstream 242819 14571755 ~ 14579169 (-) False naa30
TU250064 other upstream 1459978 15788914 ~ 15791558 (-) False si:dkey-177p2.18
XR_005636881.1 other upstream 2161714 16490650 ~ 16517872 (-) False snap91b
XR_005637006.1 other upstream 2500860 16829796 ~ 16835983 (-) False gpatch2

Expression Profile