RNA id: TU249565


Basic Information

Item Value
RNA id TU249565
length 1695
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G184292
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14423153 ~ 14424847 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AAATTTATAAATATTCTTTCGATGGAACATTAAATCAGTAGGGATGTTGTATAATTCTTCCAAAAGATCCAAGAGCTTTTCAGAGAAAACATGACAAAGTGACAATAATCTGATACACACATTGCTTCTCTACTCCAAAAAATATCTAGACTTTTTACTGTATATCCCCTGttattttttccaaatatatcaaaatatatgttGACAATAAGCATCAATACAGACCACACAGAAAGCAGAATCTCATGGGTTGGGCAGGTGCTTCTGTTTTTTTGACTCATGGAGTGAACACACTTCCTGTGTGGCATCAGTACAGGTCACTCAGTGTTTGGCCCCTGCCACTGTGGACAGCCATACGTACACGGAAACGGACTCTTCCCGAGTGCTGGCCATGCCTTGTTTTCATGGCAACGAAGGATGCAACTGTGTCCATGCAAAGCTGCTAGGAAagtcacaaaataataacataCAATCTAGTCCATGCTTTTTTTTGCAGGGCTGGCCAGCACTTGGGAGGATGACTCATGGCAACTTCCTTTACTGAGCTTTCTTCATTTCCTTTTCCACGAAGCTACTGCATCACTCTCAGTAGCCAAAGATAGGATGCAAGGAAAGAGAACAAGGAGAGGAATGGGATGTGGCCATGAGACTGTTCCGCACACATTGGATTCCTGCCCTCTAGGGGACAAACAACGTCAATGCACATCTAGGAGAAAGTCTGAGAAAGGCAATGGTGGCCAGCTGATTTGGATGGTGGGAGAAGCTGTTAAGCAAATCCTCAACTTCACCTACTCCTCTATAATATGAAAATTCCTTAATTTCCTCTCAGCCCACTGGAAAACCTTGAAgttttaatgatttaaaaaaggGACTGTATGGAAATTATTAGGTTGGGGAGGTAaatcttgtgttttgttttattaaaaagcAAGGCCCTCCCTGTaacttacaaaaaaaactgtataaaCTCCCCTCAAGATCTTACAATAACATATGAACATAAAgtagggaaatacagtcactctCTGTTAATGGCGATTTGAGCAACGCAATATTTTCACTTTAGACTATAcgtaaaaaaagataaaaaataacacCCTCCCTGCTCTCCCAACAAATATAGACTATCGTCAATTAAGCCAAATATTTAAGAAGAATGCACAATTTCTCAGTGACCCGTCCTCCCTAGTAATTTTCATACAGTCCCTAATTTATGACACTTGCTGAAAACCCTTTATACTTTTGGGCTAGGGTTAGAGAAGAGAAACTGACCTGAGGAGATTTTCTACCTGGAGGCCAGAGGACGTCCCGTCCTGTCTCAGGTGTACGGCCTGTCTCTCCCCTAATAGGACGAATCAATAACAGCTCAGGTGACCATGTTGCCATGGCATTCTCCCAAACGTCACACTTAAGGTCAGTCAGGTTAGGCAGGAGAGCCAGAAGTCGTCTCTTCCCGCAGGTCTCAGGTCAGATTTGACTTTTAGTATCTCAAAAGGAGAATCAAATCTGACTGTGATCCGCGGCCACTTCTGCTCTCCCTGTCTGCCAGGGTGTGCTTTGGTCTGCTCTCCACCCCCTGACAACTAAATGATAGCAACTAAACAACATTTACATCTCTGTCAACAACCGCCACTCAACCATTTCATTTCTAACTTATAAGTTACAAATAAACAGAAAGCATTTCTATCCTGGAGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU249564 lncRNA downstream 5905 14416872 ~ 14417248 (-) True G184291
TU249563 lncRNA downstream 6982 14414256 ~ 14416171 (-) True G184290
TU249562 lncRNA downstream 13896 14408988 ~ 14409257 (-) True G184289
TU249559 lncRNA downstream 29042 14393447 ~ 14394111 (-) True G184286
TU249475 lncRNA downstream 94217 14249214 ~ 14328936 (-) True G184224
TU249567 lncRNA upstream 2957 14427804 ~ 14432172 (-) True G184293
TU249570 lncRNA upstream 7384 14432231 ~ 14438955 (-) False G184295
TU249571 lncRNA upstream 7384 14432231 ~ 14438955 (-) True G184295
TU249589 lncRNA upstream 66252 14491099 ~ 14493568 (-) True G184306
TU249640 lncRNA upstream 230810 14655657 ~ 14656247 (-) True G184346
XM_039781332.1 mRNA downstream 34710 14387520 ~ 14388443 (-) True LOC120546407
XM_039781331.1 mRNA downstream 41976 14380014 ~ 14381177 (-) True LOC120546406
XM_039782071.1 mRNA downstream 44598 14360513 ~ 14378555 (-) False magl
XM_039782070.1 mRNA downstream 44598 14360513 ~ 14378555 (-) True magl
XM_039782356.1 mRNA downstream 63763 14335639 ~ 14359390 (-) True LOC120547016
XM_039782567.1 mRNA upstream 84601 14509448 ~ 14524171 (-) True lrfn5b
XM_039782477.1 mRNA upstream 100388 14525235 ~ 14529353 (-) True LOC120547074
XM_039781696.1 mRNA upstream 123191 14548038 ~ 14560460 (-) False znf410
XM_039781695.1 mRNA upstream 123191 14548038 ~ 14560460 (-) True znf410
XM_039782750.1 mRNA upstream 136560 14561407 ~ 14566531 (-) True cipcb
TU249319 other downstream 932025 13481924 ~ 13491128 (-) False mfsd2b
TU249306 other downstream 955088 13458616 ~ 13468065 (-) True fkbp1b
TU249194 other downstream 1207329 13206307 ~ 13215824 (-) False hmgn3
TU249578 other upstream 47354 14472201 ~ 14498370 (-) True G184299
TU249614 other upstream 146908 14571755 ~ 14579169 (-) False naa30
TU250064 other upstream 1364067 15788914 ~ 15791558 (-) False si:dkey-177p2.18
XR_005636881.1 other upstream 2065803 16490650 ~ 16517872 (-) False snap91b
XR_005637006.1 other upstream 2404949 16829796 ~ 16835983 (-) False gpatch2

Expression Profile