RNA id: TU249570



Basic Information


Item Value
RNA id TU249570
length 656
lncRNA type inter_gene
GC content 0.56
exon number 6
gene id G184295
representative False

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14432231 ~ 14438955 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AAAGGTGTAGAAAATCTATCTCTACCCTCAGTAACAAATCTGAAAGTACTGGCTGGGTGATTTGAGGGGGCTCTTGTAGCTGGATGTGTCCTGCGCTGTGCTCTGGCTGGTTGTGGTTTTCTGCAGGTTTAAGGTGAAGGACGGGGTCGTCTTCTTTCCCTCTAGCTTGCTGCCCCCCCTTGCCTGAGGGTTGTTAGGTGTGGCCGTGGGCCCTCTGTTGGCAGGCACAGCGGCGGGGGATTTGGCGGTCTCAGAAGATCCAGTCTTTCTTGTGAGGGGGCTCAGATAGATCTTTGCAGTGTGTCACACGCCTTGTCCCGACACTTACTGCACTCTCCTTGGACTTGCCTTCCGGAGGTTTCTTACAGGTGGAGGCTGCAGAGGTGAGTCGTTTAGCGGTCTTGCATGGACTGTCCTTCACACTACCCGGGGGGCTCTTCACACCaCTGCCGGGCGGTGTTGGGCTGTAGTTCTTGGCTGGGACGCTGGAGGGCAGCGTGGAGCTCTTCTTCAGGGAGGCAGTGCTGGAGATCACCATAGGCGGTTTGGAGGGCAGAAGTAGAGACACTGGCCGGGCTTTAACGCCTGATGGTCTCCTAACAGCACCAGAGGCAGCAGCTGCTTGGTGCTCCTCAGATATGTTGAGCCTCTTGAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU249567 lncRNA downstream 59 14427804 ~ 14432172 (-) True G184293
TU249565 lncRNA downstream 7384 14423153 ~ 14424847 (-) True G184292
TU249564 lncRNA downstream 14983 14416872 ~ 14417248 (-) True G184291
TU249563 lncRNA downstream 16060 14414256 ~ 14416171 (-) True G184290
TU249562 lncRNA downstream 22974 14408988 ~ 14409257 (-) True G184289
TU249589 lncRNA upstream 52144 14491099 ~ 14493568 (-) True G184306
TU249640 lncRNA upstream 216702 14655657 ~ 14656247 (-) True G184346
TU249642 lncRNA upstream 228180 14667135 ~ 14667581 (-) False LOC120547045
TU249658 lncRNA upstream 232939 14671894 ~ 14677060 (-) True G184356
TU249666 lncRNA upstream 250351 14689306 ~ 14689940 (-) True G184360
XM_039781332.1 mRNA downstream 43788 14387520 ~ 14388443 (-) True LOC120546407
XM_039781331.1 mRNA downstream 51054 14380014 ~ 14381177 (-) True LOC120546406
XM_039782071.1 mRNA downstream 53676 14360513 ~ 14378555 (-) False magl
XM_039782070.1 mRNA downstream 53676 14360513 ~ 14378555 (-) True magl
XM_039782356.1 mRNA downstream 72841 14335639 ~ 14359390 (-) True LOC120547016
XM_039782567.1 mRNA upstream 70493 14509448 ~ 14524171 (-) True lrfn5b
XM_039782477.1 mRNA upstream 86280 14525235 ~ 14529353 (-) True LOC120547074
XM_039781696.1 mRNA upstream 109083 14548038 ~ 14560460 (-) False znf410
XM_039781695.1 mRNA upstream 109083 14548038 ~ 14560460 (-) True znf410
XM_039782750.1 mRNA upstream 122452 14561407 ~ 14566531 (-) True cipcb
TU249319 other downstream 941103 13481924 ~ 13491128 (-) False mfsd2b
TU249306 other downstream 964166 13458616 ~ 13468065 (-) True fkbp1b
TU249194 other downstream 1216407 13206307 ~ 13215824 (-) False hmgn3
TU249578 other upstream 33246 14472201 ~ 14498370 (-) True G184299
TU249614 other upstream 132800 14571755 ~ 14579169 (-) False naa30
TU250064 other upstream 1349959 15788914 ~ 15791558 (-) False si:dkey-177p2.18
XR_005636881.1 other upstream 2051695 16490650 ~ 16517872 (-) False snap91b
XR_005637006.1 other upstream 2390841 16829796 ~ 16835983 (-) False gpatch2

Expression Profile