RNA id: TU253978


Basic Information

Item Value
RNA id TU253978
length 570
RNA type TUCP
GC content 0.48
exon number 2
gene id nudt14
representative False

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 26006854 ~ 26036232 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGACAAACCCGACCTATCTCTGGAGGAGATCGCCCGGCAGGAGGTGCTGGAGGAGTGTGGCTACGATGTGCCTGCCTCTAAACTGAAGAGGATTACTTCTTACAGGTCAGGCGTAGGTGTAACAGGCGCCAAGCAGACCATGTTTTACGCCGAGGTGTCTGATGACAACTGTGTGAGCGCAGGTGGAGGTGAGCCAAAGGAGGGAGAGCTTATCGAGGTGGTCAAAGTCCCGCTGCACGAGGCCATGACGTTCGCCTACGACGAGCGTATACCCAAAACCATGGGCGTCATATTTAGTTTCATCTGGTTCCATAATAACATGTCTCCCAAGTACAAGATCTCCACCAATGTGTAACTAGTATTAACCAACCCTCTTTATACTGTTTATTCCAAATTAGATCAAACACAGGCCCAGCACATCCACACTTCCCCACATGGCCCTTCATCCTGTATTGCCTTTGTGCTTATTGGTACATGATGAAAGGTGGGCCCCTTGTCTTGTTGCCAACAGGTATCTTTAAGTTTTGTCCCGTTTACCTTTTTGAGTTTCATGTGGTCTTAATATTTTGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU253943 lncRNA upstream 138 26006921 ~ 26027922 (+) False nudt14
TU253938 lncRNA upstream 59135 25968206 ~ 25968925 (+) False LOC120546493
TU253941 lncRNA upstream 60760 25967006 ~ 25967300 (+) True G187431
TU253934 lncRNA upstream 92801 25929576 ~ 25935259 (+) False abracl
TU253932 lncRNA upstream 94113 25930048 ~ 25933947 (+) False abracl
XR_005637043.1 lncRNA downstream 217378 26247778 ~ 26249685 (+) True LOC120547280
TU254021 lncRNA downstream 227095 26257495 ~ 26260894 (+) False atp5mj
TU254024 lncRNA downstream 241968 26272368 ~ 26272595 (+) True G187508
TU254063 lncRNA downstream 284722 26315122 ~ 26315654 (+) True G187535
TU254064 lncRNA downstream 294116 26324516 ~ 26324734 (+) True G187536
XM_039781433.1 mRNA upstream 35187 25970398 ~ 25992873 (+) False knl1
XM_039781432.1 mRNA upstream 35187 25970569 ~ 25992873 (+) True knl1
XM_039781434.1 mRNA upstream 59135 25955250 ~ 25968925 (+) True LOC120546493
XM_039781435.1 mRNA upstream 78650 25937301 ~ 25949410 (+) True heca
XM_039782466.1 mRNA upstream 92789 25930002 ~ 25935271 (+) True abracl
XM_039782075.1 mRNA downstream 17072 26047472 ~ 26102398 (+) False jag2b
XM_039782074.1 mRNA downstream 17074 26047474 ~ 26102398 (+) True jag2b
XM_039782810.1 mRNA downstream 109009 26139409 ~ 26159436 (+) True esr2a
XM_039780906.1 mRNA downstream 227075 26257475 ~ 26260895 (+) True atp5mj
XM_039782726.1 mRNA downstream 234789 26265189 ~ 26283008 (+) True gareml
unassigned_transcript_1083 other upstream 808120 25219868 ~ 25219940 (+) True trnat-ugu_3
TU253601 other upstream 1018653 25004019 ~ 25009407 (+) False lama2
TU253479 other upstream 1520247 24506913 ~ 24507813 (+) True G187094
TU253325 other upstream 1944956 24079603 ~ 24083104 (+) True G186975
XR_005636956.1 other upstream 2438371 23578378 ~ 23589689 (+) True nfkbie
TU254022 other downstream 246295 26276695 ~ 26281368 (+) False gareml
TU254081 other downstream 415250 26445650 ~ 26452304 (+) False tfap2b
TU254083 other downstream 415250 26445650 ~ 26452304 (+) False tfap2b
XR_005637060.1 other downstream 626941 26657341 ~ 26657503 (+) True LOC120547357
TU254123 other downstream 652495 26682895 ~ 26685507 (+) True G187574

Expression Profile