RNA id: TU255018


Basic Information

Item Value
RNA id TU255018
length 455
RNA type TUCP
GC content 0.45
exon number 2
gene id G188296
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 29645254 ~ 29645823 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CTGTATCTGGTACCATTTGACAGAAATTCAGAGAGAGTGAAACATCTGCGCAATGAGTATGTGGAGAGAGTCTTGCAAATGGATGCTGCTGAAATTCAACATGAATTTATATATGTGGATGAGGCTGGATTTAACCTTgcaaaaacaagaagaagagggagaaatGTAATAGGGCACAGGGCAATCACTAATGTGCCAGGGCAACGAGGGGGTAACATCACCCTTTGCGCTGCTATCACACAAAATGGGGTCCTCCACCACCATGCAAATCTGGGACCCTATAATGCAAATCTGATACTTGCATTTCTTGACCGATTGCTTGAGATTGTCACCGCATTACACCAAGTGGACCAGATGCGGTACATTGTCGTTTGGGACAATGTCCCATTCCATCGGGCTGCTCTGGTCCAGAACTGGTTCCATGATCACCCTGATTTTGAAGTTTTATATCTTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU255008 lncRNA upstream 40155 29579635 ~ 29605099 (+) True G188290
TU255005 lncRNA upstream 67152 29576224 ~ 29578102 (+) True G188288
TU254998 lncRNA upstream 106802 29538175 ~ 29538452 (+) True G188281
TU254866 lncRNA upstream 198231 29443347 ~ 29447023 (+) True G188177
TU254911 lncRNA upstream 216607 29427425 ~ 29428647 (+) True G188208
XR_005636962.1 lncRNA downstream 13433 29659256 ~ 29660735 (+) True LOC120546861
XR_005636968.1 lncRNA downstream 142138 29787961 ~ 29793679 (+) True LOC120546865
XR_005636969.1 lncRNA downstream 241041 29886864 ~ 29888884 (+) True LOC120546868
TU255051 lncRNA downstream 283019 29928842 ~ 29985502 (+) True G188321
TU255055 lncRNA downstream 286727 29932550 ~ 29932860 (+) True G188323
XM_039781412.1 mRNA upstream 274104 29315759 ~ 29371150 (+) True LOC120546480
XM_039782701.1 mRNA upstream 340314 29292705 ~ 29304940 (+) True si:ch211-245h14.1
XM_039782099.1 mRNA downstream 215551 29861374 ~ 29875824 (+) True LOC120546866
XM_039782100.1 mRNA downstream 231098 29876921 ~ 29882724 (+) True LOC120546867
XM_039782112.1 mRNA downstream 249602 29895425 ~ 29943833 (+) False LOC120546870
XM_039782109.1 mRNA downstream 249602 29895425 ~ 29906694 (+) False LOC120546870
XM_039782111.1 mRNA downstream 249602 29895425 ~ 29906694 (+) False LOC120546870
TU254981 other upstream 181380 29461849 ~ 29463874 (+) True G188268
TU254910 other upstream 224527 29419376 ~ 29420727 (+) True G188207
TU254892 other upstream 332890 29292741 ~ 29312364 (+) False si:ch211-245h14.1
TU254896 other upstream 332890 29292741 ~ 29312364 (+) False si:ch211-245h14.1
TU254854 other upstream 508337 29134171 ~ 29136917 (+) True G188167
unassigned_transcript_1091 other downstream 727843 30373666 ~ 30373738 (+) True trnat-ugu_4
TU255132 other downstream 978657 30624480 ~ 30659281 (+) False G188352
XR_005636985.1 other downstream 1148396 30794219 ~ 30812143 (+) False LOC120546905
TU255105 other downstream 1208152 30853975 ~ 30855364 (+) False G188352
XR_005637052.1 other downstream 1852132 31497955 ~ 31498174 (+) True LOC120547349

Expression Profile