RNA id: TU255825


Basic Information

Item Value
RNA id TU255825
length 551
lncRNA type read_through
GC content 0.44
exon number 2
gene id G188785
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 31839806 ~ 31911299 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cccaactgtcccgttcttcttttcctaaacccaactgtcctgttcttcttttcttaaacccaactgtcccgttcttctttacctaaacccaattgtcccgttcttctttacctaaacccaaccgtcccgttcttctttacctaaacccaactgtcctgttcttcttttcctaaacccaactgtcccgttcttcttttcctaaatccaactgtcctgttcttcttttcctaaacccaactgtcccgttcttctttacctaaacccaaccgtcccattcttctttacctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttcttttcctaaacccaaccgtcccgttcttcttttcctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttcttttcctaaacccaactgtcccgttcttctttcctaaacccaactgtcccgttcttattttcctaaac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU255793 lncRNA upstream 87600 31674705 ~ 31752206 (+) True G188757
TU255807 lncRNA upstream 118519 31720092 ~ 31721287 (+) True G188768
TU255801 lncRNA upstream 128835 31708879 ~ 31710971 (+) True G188763
TU255799 lncRNA upstream 136159 31703031 ~ 31703647 (+) True G188761
TU255776 lncRNA upstream 242091 31597215 ~ 31597715 (+) True G188749
TU255856 lncRNA downstream 7700 31918999 ~ 31927133 (+) True G188809
TU255863 lncRNA downstream 35899 31947198 ~ 31952652 (+) True G188816
TU255866 lncRNA downstream 57324 31968623 ~ 31968941 (+) True G188818
TU255867 lncRNA downstream 74013 31985312 ~ 31986086 (+) True G188819
TU256051 lncRNA downstream 231817 32143116 ~ 32143380 (+) True G188960
XM_039780976.1 mRNA upstream 57740 31776963 ~ 31782066 (+) True LOC120546196
XM_039781689.1 mRNA upstream 82888 31735570 ~ 31756918 (+) True cebpz
XM_039782544.1 mRNA upstream 135443 31620408 ~ 31704363 (+) True LOC120547115
XM_039782543.1 mRNA upstream 135782 31620408 ~ 31704024 (+) False LOC120547115
XM_039782030.1 mRNA upstream 225284 31607288 ~ 31614522 (+) True LOC120546816
XM_039782828.1 mRNA downstream 182652 32093951 ~ 32105660 (+) True crnkl1
XM_039782818.1 mRNA downstream 200291 32111590 ~ 32145910 (+) True cd109
XM_039782844.1 mRNA downstream 624436 32535735 ~ 32569277 (+) True senp6a
XM_039782846.1 mRNA downstream 624436 32535735 ~ 32569277 (+) False senp6a
XM_039781369.1 mRNA downstream 665157 32576456 ~ 32767003 (+) True myo6a
TU255816 other upstream 58768 31777029 ~ 31781038 (+) False LOC120546196
TU255785 other upstream 229705 31606054 ~ 31610101 (+) False LOC120546816
XR_005637055.1 other upstream 335578 31504009 ~ 31504228 (+) True LOC120547352
XR_005637054.1 other upstream 338752 31500835 ~ 31501054 (+) True LOC120547351
XR_005637053.1 other upstream 340478 31499109 ~ 31499328 (+) True LOC120547350
TU256147 other downstream 665179 32576478 ~ 32622264 (+) False myo6a
TU256417 other downstream 1416804 33328103 ~ 33331713 (+) False pex7
TU256470 other downstream 1542697 33453996 ~ 33458768 (+) True G189269
TU256525 other downstream 1730321 33641620 ~ 33685556 (+) True G189309
XR_005637066.1 other downstream 1852166 33763465 ~ 33763626 (+) True LOC120547364

Expression Profile