RNA id: TU256503



Basic Information


Item Value
RNA id TU256503
length 292
lncRNA type intronic
GC content 0.46
exon number 2
gene id G189294
representative False

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 33886415 ~ 33944584 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgttaagGCCATGTAATGATGTGTGTAATGATGAAGTGTGACGACAGGACTGCTGGTGTTTTTAACATTTGGCTGACGGCAGGCCGAGAGGGAGTTGAACCTGCGACCTTTTGTGTTGGCAGAGGATCTCGGCTGATTTGTGTCTCTGGGAGGTGGAAAACATTTCAGCTACACAGCCTCGGGAGGAGGAGGGCTTTTTTAATTCTAAATTATTGCTGTTTTATAATCCAAATATCTGTCTTTGACCTGAAATTGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU256563 lncRNA upstream 1417 33839721 ~ 33884998 (+) True G189339
TU256568 lncRNA upstream 9968 33863205 ~ 33876447 (+) True G189344
TU256566 lncRNA upstream 30946 33853678 ~ 33855469 (+) False LOC120546446
TU256546 lncRNA upstream 54812 33760348 ~ 33831603 (+) False G189327
TU256710 lncRNA downstream 103049 34046611 ~ 34047007 (+) True G189439
XR_005636834.1 lncRNA downstream 126039 34069601 ~ 34071742 (+) True LOC120546208
XR_005637028.1 lncRNA downstream 136697 34080259 ~ 34096714 (+) True LOC120547081
TU256727 lncRNA downstream 157949 34101511 ~ 34102289 (+) True G189450
XR_005636863.1 lncRNA downstream 159181 34102743 ~ 34104308 (+) True LOC120546319
XM_039781373.1 mRNA upstream 30003 33846444 ~ 33856412 (+) True LOC120546446
XM_039781371.1 mRNA upstream 115013 33765353 ~ 33771402 (+) True LOC120546444
XM_039780949.1 mRNA upstream 220162 33629800 ~ 33666253 (+) True LOC120546181
XM_039780971.1 mRNA upstream 470329 33399801 ~ 33416086 (+) True LOC120546192
XM_039782542.1 mRNA upstream 499426 33328092 ~ 33386989 (+) False pex7
XM_039781947.1 mRNA downstream 64834 34008396 ~ 34013448 (+) False LOC120546767
XM_039781946.1 mRNA downstream 67378 34010940 ~ 34013448 (+) True LOC120546767
XM_039781374.1 mRNA downstream 75069 34018631 ~ 34035953 (+) True LOC120546447
XM_039782426.1 mRNA downstream 93494 34037056 ~ 34052641 (+) True LOC120547053
XM_039782425.1 mRNA downstream 95000 34038562 ~ 34052641 (+) False LOC120547053
TU256516 other upstream 26012 33859146 ~ 33860403 (+) False LOC120546766
TU256542 other upstream 115042 33765501 ~ 33771373 (+) False LOC120546444
XR_005637066.1 other upstream 122789 33763465 ~ 33763626 (+) True LOC120547364
TU256525 other upstream 200859 33641620 ~ 33685556 (+) True G189309
TU256470 other upstream 427647 33453996 ~ 33458768 (+) True G189269
TU256520 other downstream 22021 33965583 ~ 33986476 (+) True G189305
TU256875 other downstream 519346 34462908 ~ 34464897 (+) True G189544
TU256872 other downstream 539302 34482864 ~ 34503755 (+) True G189541
TU256921 other downstream 542862 34486424 ~ 34487177 (+) True G189570
XR_005637062.1 other downstream 575726 34519288 ~ 34519426 (+) True LOC120547360

Expression Profile