RNA id: TU256520


Basic Information

Item Value
RNA id TU256520
length 258
RNA type TUCP
GC content 0.48
exon number 2
gene id G189305
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 33965583 ~ 33986476 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgtgtatatatgtgtgtgtctctgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgagtgtgagtgtgtgtctctgtgtgtgtgagtgtgagtgtgtgtctctgtctgtgtctgtgtgtttctatgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctttctgtgtgtgtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU256504 lncRNA upstream 20999 33886415 ~ 33944584 (+) True G189294
TU256503 lncRNA upstream 22021 33886415 ~ 33943562 (+) False G189294
TU256499 lncRNA upstream 22021 33910022 ~ 33943562 (+) False G189294
TU256580 lncRNA upstream 27234 33938055 ~ 33938349 (+) True G189352
TU256517 lncRNA upstream 68010 33887512 ~ 33897573 (+) True G189302
TU256710 lncRNA downstream 60135 34046611 ~ 34047007 (+) True G189439
XR_005636834.1 lncRNA downstream 83125 34069601 ~ 34071742 (+) True LOC120546208
XR_005637028.1 lncRNA downstream 93783 34080259 ~ 34096714 (+) True LOC120547081
TU256727 lncRNA downstream 115035 34101511 ~ 34102289 (+) True G189450
XR_005636863.1 lncRNA downstream 116267 34102743 ~ 34104308 (+) True LOC120546319
XM_039781373.1 mRNA upstream 109171 33846444 ~ 33856412 (+) True LOC120546446
XM_039781371.1 mRNA upstream 194181 33765353 ~ 33771402 (+) True LOC120546444
XM_039780949.1 mRNA upstream 299330 33629800 ~ 33666253 (+) True LOC120546181
XM_039780971.1 mRNA upstream 549497 33399801 ~ 33416086 (+) True LOC120546192
XM_039782542.1 mRNA upstream 578594 33328092 ~ 33386989 (+) False pex7
XM_039781947.1 mRNA downstream 21920 34008396 ~ 34013448 (+) False LOC120546767
XM_039781946.1 mRNA downstream 24464 34010940 ~ 34013448 (+) True LOC120546767
XM_039781374.1 mRNA downstream 32155 34018631 ~ 34035953 (+) True LOC120546447
XM_039782426.1 mRNA downstream 50580 34037056 ~ 34052641 (+) True LOC120547053
XM_039782425.1 mRNA downstream 52086 34038562 ~ 34052641 (+) False LOC120547053
TU256522 other upstream 26196 33932064 ~ 33939387 (+) True G189307
TU256516 other upstream 105180 33859146 ~ 33860403 (+) False LOC120546766
TU256542 other upstream 194210 33765501 ~ 33771373 (+) False LOC120546444
XR_005637066.1 other upstream 201957 33763465 ~ 33763626 (+) True LOC120547364
TU256525 other upstream 280027 33641620 ~ 33685556 (+) True G189309
TU256875 other downstream 476432 34462908 ~ 34464897 (+) True G189544
TU256872 other downstream 496388 34482864 ~ 34503755 (+) True G189541
TU256921 other downstream 499948 34486424 ~ 34487177 (+) True G189570
XR_005637062.1 other downstream 532812 34519288 ~ 34519426 (+) True LOC120547360
XR_005637063.1 other downstream 538412 34524888 ~ 34525026 (+) True LOC120547361

Expression Profile