RNA id: TU256527


Basic Information

Item Value
RNA id TU256527
length 220
lncRNA type inter_gene
GC content 0.46
exon number 3
gene id G189311
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 33743508 ~ 33762216 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cacacacacacatatatacacacacacacacacacacagatatacacacacacacacacacacacacacacagacagacagacagacagacagacacacacacacacactcaaacacacacagacactcacacacacacagtcactcacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacatatataca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU256524 lncRNA upstream 57952 33685197 ~ 33685556 (+) False G189309
TU256492 lncRNA upstream 158227 33584982 ~ 33585281 (+) True G189289
TU256472 lncRNA upstream 248580 33494641 ~ 33494928 (+) True G189271
TU256463 lncRNA upstream 299456 33441481 ~ 33444052 (+) True G189263
TU256461 lncRNA upstream 307377 33435785 ~ 33436131 (+) True G189262
TU256547 lncRNA downstream 10422 33772638 ~ 33773109 (+) True G189328
TU256514 lncRNA downstream 52688 33814904 ~ 33827371 (+) True G189299
TU256545 lncRNA downstream 68736 33830952 ~ 33831603 (+) True G189327
TU256563 lncRNA downstream 77505 33839721 ~ 33884998 (+) True G189339
TU256566 lncRNA downstream 91462 33853678 ~ 33855469 (+) False LOC120546446
XM_039780949.1 mRNA upstream 77255 33629800 ~ 33666253 (+) True LOC120546181
XM_039780971.1 mRNA upstream 327422 33399801 ~ 33416086 (+) True LOC120546192
XM_039782540.1 mRNA upstream 356519 33328092 ~ 33386989 (+) False pex7
XM_039781371.1 mRNA downstream 3137 33765353 ~ 33771402 (+) True LOC120546444
XM_039781373.1 mRNA downstream 84228 33846444 ~ 33856412 (+) True LOC120546446
XM_039781945.1 mRNA downstream 96936 33859152 ~ 34000536 (+) True LOC120546766
XM_039781947.1 mRNA downstream 246180 34008396 ~ 34013448 (+) False LOC120546767
XM_039781946.1 mRNA downstream 248724 34010940 ~ 34013448 (+) True LOC120546767
TU256525 other upstream 57952 33641620 ~ 33685556 (+) True G189309
TU256470 other upstream 284740 33453996 ~ 33458768 (+) True G189269
TU256417 other upstream 411795 33328103 ~ 33331713 (+) False pex7
TU256147 other upstream 1121244 32576478 ~ 32622264 (+) False myo6a
TU255816 other upstream 1962470 31777029 ~ 31781038 (+) False LOC120546196
XR_005637066.1 other downstream 1249 33763465 ~ 33763626 (+) True LOC120547364
TU256542 other downstream 3285 33765501 ~ 33771373 (+) False LOC120546444
TU256516 other downstream 96930 33859146 ~ 33860403 (+) False LOC120546766
TU256522 other downstream 169848 33932064 ~ 33939387 (+) True G189307
TU256520 other downstream 203367 33965583 ~ 33986476 (+) True G189305

Expression Profile